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See other LMF1 CNV Assays ›
Gene Symbol
LMF1
Assay Reference Genome
Location

Chr.16:927303 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03933436_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 64788

Gene Name:

 lipase maturation factor 1

Gene Aliases:

 C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A

Location:

 Chr.16:853632-981615 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1 NM_022773.2 NP_073610.2
NR_033645.1
NR_033646.1
XM_006720928.2 XP_006720991.1
XM_006720929.3 XP_006720992.1
XM_011522614.2 XP_011520916.1
XM_011522615.1 XP_011520917.1
XM_011522617.2 XP_011520919.1
XM_011522618.2 XP_011520920.1
XM_017023575.1 XP_016879064.1
XM_017023576.1 XP_016879065.1
XM_017023577.1 XP_016879066.1
XM_017023578.1 XP_016879067.1
XM_017023579.1 XP_016879068.1
XM_017023580.1 XP_016879069.1
XM_017023581.1 XP_016879070.1
AB075873.1 BAD38655.1
AK022743.1 BAB14218.1
AK025955.1 BAB15295.1
AK093050.1
AK125201.1
AK225065.1
AK225406.1
AK294329.1
AK294932.1
BC010738.1 AAH10738.2
DA200865.1

Target Gene Details

Entrez Gene ID:

 101929387

Gene Name:

 LMF1 antisense RNA 1

Gene Aliases:

 LA16c-366D3.1

Location:

 Chr.16:921033-934524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1-AS1 NR_110945.1
NR_110946.1
BM547968.1
BX397433.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain LOC107984876 SSTR5-AS1 SOX8 LMF1-AS1 CACNA1H LMF1 C1QTNF8 SSTR5
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication C16orf59 NTN3 SOX8 BAIAP3 NOXO1 MIR5587 CCDC78 DECR2 PTX4 LMF1 TPSB2 TMEM8A POLR3K RNPS1 TSR3 FLJ42627 FAHD1 WDR90 MIR4717 TPSAB1 MPG AXIN1 SYNGR3 LOC105371045 TBC1D24 KCTD5 MIR3180-5 CHTF18 ECI1 LINC00235 LOC105371046 MIR662 ERVK13-1 PRSS29P IGFALS RAB26 LOC652276 METRN SPSB3 PKD1 PRR25 MSRB1 FAM173A LMF1-AS1 AMDHD2 FAM234A SNORA64 HAGH MIR6767 MIR1225 PDPK1 SNHG19 LUC7L HBM LOC101929280 PGP CCDC154 CLCN7 LOC105371047 JMJD8 MIR3677 TELO2 METTL26 LOC100134368 TPSG1 CASKIN1 MIR3176 ZNF598 CRAMP1 MRPL28 MIR3178 NPW GFER LOC106660606 EME2 UBE2I C1QTNF8 SSTR5 SNRNP25 CAPN15 RHBDF1 NME4 SSTR5-AS1 NDUFB10 DNASE1L2 HBA1 TSC2 HAGHL ARHGDIG BRICD5 NTHL1 RGS11 LINC00254 TPSD1 ATP6V0C SNORA10 TBL3 MSLN MEIOB MIR6768 RHBDL1 HBA2 SLC9A3R2 PRR35 MLST8 TRAF7 LOC105371049 HBQ1 FBXL16 GNPTG SNHG9 SNORD60 RPL3L DDX11L10 CCNF MRPS34 GNG13 NHLRC4 LOC107984876 HN1L NARFL LOC729652 WDR24 LOC107987233 RAB40C PIGQ ABCA3 MIR6859-4 MIR940 TMEM204 STUB1 WFIKKN1 RPS2 CACNA1H NUBP2 MIR3177 WASIR2 ABCA17P C16orf91 RPUSD1 NPRL3 RNF151 MIR4516 LOC105371038 IFT140 CEMP1 SNORA78 MCRIP2 LOC100287175 NME3 MAPK8IP3 RHOT2 PRSS27 HS3ST6 RAB11FIP3 LOC105371184 RPL23AP5 PDIA2 MIR6511B1 UNKL HBZ E4F1
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LOC107984876 CCDC154 SSTR5-AS1 SOX8 BAIAP3 CLCN7 LMF1-AS1 TPSG1 LMF1 TPSB2 PRSS29P TSR3 GNPTG TPSD1 CACNA1H TPSAB1 C16orf91 UBE2I C1QTNF8 SSTR5 UNKL LOC105371045
nsv1046349 Chr.16:819378 - 942590 on Build GRCh38 Loss LOC107984876 LMF1-AS1 LMF1
nsv1042868 Chr.16:881686 - 966057 on Build GRCh38 Loss LOC107984876 LMF1-AS1 LMF1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion NHLRC4 LOC107984876 SSTR5-AS1 SOX8 FAM173A NARFL LMF1-AS1 WDR24 MIR5587 CCDC78 LOC107987233 LMF1 RAB40C PIGQ HAGHL STUB1 WFIKKN1 WDR90 LOC101929280 RPUSD1 MSLN LOC105371038 CHTF18 JMJD8 RHBDL1 METTL26 LINC00235 MIR662 PRR35 FBXL16 MCRIP2 MIR3176 LOC100287175 METRN RHOT2 RAB11FIP3 LOC105371184 PRR25 C1QTNF8 SSTR5 CAPN15 GNG13
nsv457316 Chr.16:884180 - 933163 on Build GRCh38 Loss LOC107984876 LMF1-AS1 LMF1

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