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See other GNPTG CNV Assays ›
Gene Symbol
GNPTG
Assay Reference Genome
Location

Chr.16:1354006 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03934545_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84572

Gene Name:

 N-acetylglucosamine-1-phosphate transferase gamma subunit

Gene Aliases:

 C16orf27, GNPTAG, LP2537, RJD9

Location:

 Chr.16:1351899-1363351 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
AF302786.1 AAG27706.1
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
DT219524.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain TELO2 CCDC154 LOC105371045 PTX4 TSR3 CLCN7 C16orf91 UNKL BAIAP3 GNPTG IFT140 UBE2I
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NPW ABCA3 MIR3177 SYNGR3 CLCN7 FAM234A TPSD1 C16orf59 FAM173A LOC105371046 HBM BRICD5 RNF151 ATP6V0C MCRIP2 TMEM204 RPL23AP5 MIR6859-4 MIR662 PRSS29P SNORA10 MRPL28 RNPS1 LUC7L PIGQ AMDHD2 MIR6768 SPSB3 MAPK8IP3 TPSAB1 HBQ1 ARHGDIG SSTR5 SOX8 WDR24 ECI1 TSC2 RHBDL1 MIR6511B1 GNG13 PRSS27 GNPTG RGS11 TELO2 LOC105371047 GFER C16orf91 TPSG1 CEMP1 HAGHL CHTF18 SNHG19 LOC107984876 WASIR2 MRPS34 MSRB1 CASKIN1 NTN3 MIR4717 CACNA1H MIR6767 HBZ SNRNP25 HAGH PRR25 AXIN1 RPL3L CCDC154 MLST8 TBC1D24 C1QTNF8 TPSB2 ERVK13-1 MIR1225 LOC100134368 HS3ST6 HBA2 CAPN15 MIR940 FBXL16 PRR35 NUBP2 MIR5587 NOXO1 DNASE1L2 PGP MIR3176 SNORA78 SSTR5-AS1 LOC105371184 IGFALS LINC00235 RPS2 HBA1 SNORA64 NME4 RAB11FIP3 FAHD1 METTL26 LOC106660606 UNKL PKD1 NTHL1 NARFL STUB1 TRAF7 METRN CCDC78 NPRL3 POLR3K DECR2 SNHG9 RAB26 MPG CCNF PTX4 SLC9A3R2 MIR3178 RHOT2 NHLRC4 TBL3 JMJD8 LOC652276 MIR3180-5 ZNF598 LOC101929280 MIR4516 WDR90 ABCA17P KCTD5 LOC105371045 LOC729652 EME2 HN1L MIR3677 MEIOB LMF1-AS1 MSLN PDPK1 TSR3 LOC105371049 LOC100287175 LINC00254 PDIA2 NME3 LOC107987233 FLJ42627 IFT140 UBE2I LOC105371038 SNORD60 E4F1 RHBDF1 WFIKKN1 TMEM8A DDX11L10 LMF1 RAB40C NDUFB10 BAIAP3 CRAMP1 RPUSD1
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss PRSS29P CACNA1H TSR3 CLCN7 UNKL TPSD1 GNPTG UBE2I TPSAB1 CCDC154 SSTR5-AS1 C1QTNF8 LOC105371045 TPSB2 SSTR5 C16orf91 TPSG1 LMF1-AS1 LMF1 BAIAP3 SOX8 LOC107984876
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain PRSS29P CACNA1H TSR3 UNKL TPSD1 GNPTG UBE2I TPSAB1 SSTR5-AS1 C1QTNF8 TPSB2 SSTR5 TPSG1 BAIAP3
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss PRSS29P CACNA1H TSR3 UNKL TPSD1 GNPTG UBE2I TPSAB1 SSTR5-AS1 C1QTNF8 TPSB2 SSTR5 TPSG1 LMF1-AS1 LMF1 BAIAP3 SOX8
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion PRSS29P CACNA1H TSR3 CLCN7 UNKL TPSD1 GNPTG IFT140 UBE2I TPSAB1 TELO2 CCDC154 LOC105371047 LOC105371045 PTX4 TPSB2 C16orf91 TPSG1 BAIAP3 TMEM204
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss PRSS29P TSR3 C16orf91 UNKL TPSD1 BAIAP3 GNPTG UBE2I TPSAB1

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