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See other SPIRE2 CNV Assays ›
Gene Symbol
SPIRE2
Assay Reference Genome
Location

Chr.16:89829567 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03935729_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 84501

Gene Name:

 spire type actin nucleation factor 2

Gene Aliases:

 Spir-2

Location:

 Chr.16:89817477-89871319 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPIRE2 NM_032451.1 NP_115827.1
XM_011523379.1 XP_011521681.1
XM_011523380.2 XP_011521682.1
XM_011523381.1 XP_011521683.1
XM_011523384.1 XP_011521686.1
XM_011523385.1 XP_011521687.1
XM_017023781.1 XP_016879270.1
AJ422077.1 CAD19439.1
AL834408.1 CAD39070.1
BC111030.1 AAI11031.1
BX439688.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573744 Chr.16:89738447 - 89915950 on Build GRCh38 Loss FANCA LOC105371419 ZNF276 LOC107984817 SPIRE2 TCF25
esv3553914 Chr.16:89829577 - 89832023 on Build GRCh38 Deletion LOC107984817 SPIRE2
esv2758671 Chr.16:89804324 - 89901541 on Build GRCh38 Loss FANCA LOC105371419 LOC107984817 SPIRE2 TCF25
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain FANCA LOC105371419 ZNF276 VPS9D1 LOC107984817 VPS9D1-AS1 SPIRE2 SPATA2L SPATA33 CDK10
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss FANCA LOC105371419 ZNF276 DBNDD1 VPS9D1 MC1R DPEP1 AFG3L1P CDK10 TCF25 TUBB3 CHMP1A LOC107984817 VPS9D1-AS1 SPIRE2 GAS8-AS1 SPATA2L CENPBD1 GAS8 SPATA33 DEF8
nsv1059577 Chr.16:89808798 - 89837105 on Build GRCh38 Loss FANCA LOC107984817 SPIRE2
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss FANCA ZNF276 MC1R DPEP1 TUBB8P7 ANKRD11 TCF25 LOC101927817 TUBB3 FAM157C CHMP1A RPL13 VPS9D1-AS1 GAS8-AS1 SPATA2L GAS8 DEF8 SPG7 LOC105371419 DBNDD1 VPS9D1 AFG3L1P CDK10 ZNF778 LOC107984817 SPIRE2 CENPBD1 SPATA33 LOC105371414 PRDM7 URAHP CPNE7 LOC100287036 SNORD68
nsv833331 Chr.16:89726091 - 89849806 on Build GRCh38 Gain+Loss FANCA LOC105371419 ZNF276 LOC107984817 SPIRE2
dgv5324n54 Chr.16:89827575 - 89832059 on Build GRCh38 Loss LOC107984817 SPIRE2
nsv9478 Chr.16:89829349 - 89835481 on Build GRCh38 Loss LOC107984817 SPIRE2
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss FANCA LOC400558 DPEP1 TRAPPC2L TUBB8P7 ANKRD11 LOC101927817 RPL13 APRT VPS9D1-AS1 GAS8-AS1 PABPN1L GAS8 DEF8 SPG7 ACSF3 MVD LOC105371419 VPS9D1 AFG3L1P CDK10 CBFA2T3 SNAI3 GALNS MIR4722 CENPBD1 LOC105371414 CYBA LOC100287036 SNORD68 LINC00304 ZNF276 MC1R CDT1 LOC105371409 CDH15 LOC107987238 TCF25 TUBB3 FAM157C CHMP1A LOC100289580 CTU2 SNAI3-AS1 LOC101927793 SPATA2L PIEZO1 DBNDD1 RNF166 LOC339059 IL17C ZNF778 LOC107984817 LOC100129697 SPIRE2 SLC22A31 SPATA33 PRDM7 URAHP CPNE7
esv993879 Chr.16:89826094 - 89833272 on Build GRCh38 Deletion LOC107984817 SPIRE2

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More Information


Additional Information:

For this assay, SNP(s) [rs72811597] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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