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See other LMF1 CNV Assays ›
Gene Symbol
LMF1
Assay Reference Genome
Location

Chr.16:929262 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03936800_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 64788

Gene Name:

 lipase maturation factor 1

Gene Aliases:

 C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A

Location:

 Chr.16:853632-981615 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1 NM_022773.2 NP_073610.2
NR_033645.1
NR_033646.1
XM_006720928.2 XP_006720991.1
XM_006720929.3 XP_006720992.1
XM_011522614.2 XP_011520916.1
XM_011522615.1 XP_011520917.1
XM_011522617.2 XP_011520919.1
XM_011522618.2 XP_011520920.1
XM_017023575.1 XP_016879064.1
XM_017023576.1 XP_016879065.1
XM_017023577.1 XP_016879066.1
XM_017023578.1 XP_016879067.1
XM_017023579.1 XP_016879068.1
XM_017023580.1 XP_016879069.1
XM_017023581.1 XP_016879070.1
AB075873.1 BAD38655.1
AK022743.1 BAB14218.1
AK025955.1 BAB15295.1
AK093050.1
AK125201.1
AK225065.1
AK225406.1
AK294329.1
AK294932.1
BC010738.1 AAH10738.2
DA200865.1

Target Gene Details

Entrez Gene ID:

 101929387

Gene Name:

 LMF1 antisense RNA 1

Gene Aliases:

 LA16c-366D3.1

Location:

 Chr.16:921033-934524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1-AS1 NR_110945.1
NR_110946.1
BM547968.1
BX397433.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571049 Chr.16:929006 - 945894 on Build GRCh38 Loss LMF1 LMF1-AS1
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain LOC107984876 CACNA1H SOX8 LMF1 SSTR5-AS1 LMF1-AS1 C1QTNF8 SSTR5
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HAGH MIR3178 ATP6V0C LOC105371047 CCDC78 DECR2 NUBP2 RPL23AP5 IFT140 LOC729652 LOC105371184 UBE2I MIR5587 MRPL28 LINC00235 LMF1-AS1 METRN SYNGR3 MIR3180-5 MIR1225 CCDC154 AXIN1 ERVK13-1 NPW GFER SNRNP25 DDX11L10 DNASE1L2 CCNF HAGHL MIR3677 METTL26 RPL3L MIR6768 TMEM204 MSLN FBXL16 IGFALS SOX8 MIR4717 HS3ST6 RNPS1 SNORA64 HN1L MCRIP2 LOC105371045 PTX4 MEIOB RGS11 MLST8 ECI1 CASKIN1 MIR6859-4 LOC652276 SPSB3 PRSS29P NME4 RPUSD1 GNPTG TELO2 HBA1 LOC105371046 RHOT2 C16orf91 RAB40C CRAMP1 RAB26 MIR940 FLJ42627 WFIKKN1 LOC106660606 MPG NOXO1 LMF1 KCTD5 TBC1D24 FAHD1 RHBDF1 NHLRC4 PRR35 SNORD60 RAB11FIP3 LOC105371049 TMEM8A HBZ PIGQ PGP CAPN15 PRSS27 LOC100287175 MIR662 MAPK8IP3 MRPS34 RNF151 LOC105371038 MIR6511B1 CHTF18 TPSD1 NPRL3 WDR24 CEMP1 LUC7L NME3 LOC101929280 SSTR5-AS1 PDIA2 MSRB1 BRICD5 TPSB2 JMJD8 HBQ1 HBM ARHGDIG SSTR5 PKD1 LINC00254 SNORA10 MIR4516 CACNA1H PDPK1 TSR3 TRAF7 FAM173A AMDHD2 ZNF598 RHBDL1 CLCN7 GNG13 SNORA78 C1QTNF8 C16orf59 LOC107984876 HBA2 POLR3K UNKL SNHG9 BAIAP3 TPSAB1 SLC9A3R2 FAM234A NARFL ABCA3 TPSG1 MIR3176 ABCA17P WDR90 NTHL1 WASIR2 EME2 TSC2 LOC100134368 PRR25 MIR3177 NDUFB10 LOC107987233 TBL3 MIR6767 E4F1 NTN3 STUB1 RPS2 SNHG19
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss GNPTG CACNA1H TSR3 CCDC154 SOX8 TPSG1 C16orf91 CLCN7 SSTR5-AS1 C1QTNF8 LOC107984876 LOC105371045 UBE2I TPSB2 UNKL LMF1 TPSD1 BAIAP3 LMF1-AS1 TPSAB1 PRSS29P SSTR5
nsv1046349 Chr.16:819378 - 942590 on Build GRCh38 Loss LOC107984876 LMF1 LMF1-AS1
nsv1042868 Chr.16:881686 - 966057 on Build GRCh38 Loss LOC107984876 LMF1 LMF1-AS1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion FBXL16 NHLRC4 PRR35 RAB11FIP3 CCDC78 FAM173A SOX8 RHBDL1 GNG13 PIGQ C1QTNF8 MCRIP2 CAPN15 LOC107984876 LOC100287175 MIR662 LOC105371184 MIR5587 LOC105371038 LINC00235 CHTF18 LMF1-AS1 METRN RPUSD1 NARFL WDR24 RHOT2 MIR3176 LOC101929280 WDR90 SSTR5-AS1 RAB40C PRR25 WFIKKN1 HAGHL LOC107987233 METTL26 LMF1 JMJD8 STUB1 MSLN SSTR5
nsv457316 Chr.16:884180 - 933163 on Build GRCh38 Loss LOC107984876 LMF1 LMF1-AS1

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