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See other SPATA2L CNV Assays ›
Gene Symbol
SPATA2L
Assay Reference Genome
Location

Chr.16:89700553 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03937227_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 124044

Gene Name:

 spermatogenesis associated 2 like

Gene Aliases:

 C16orf76, tamo

Location:

 Chr.16:89696357-89701993 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA2L NM_152339.3 NP_689552.2
XM_005256279.4 XP_005256336.1
AK127372.1
BC027606.1 AAH27606.1
BC039608.1 AAH39608.1
BC053588.1 AAH53588.1
BI917028.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv952079 Chr.16:89685593 - 89749492 on Build GRCh38 Deletion VPS9D1-AS1 CDK10 FANCA VPS9D1 SPATA2L ZNF276
nsv573743 Chr.16:89664419 - 89853617 on Build GRCh38 Gain VPS9D1-AS1 LOC105371419 SPIRE2 CDK10 FANCA VPS9D1 LOC107984817 SPATA2L SPATA33 ZNF276
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss GAS8 GAS8-AS1 VPS9D1-AS1 LOC105371419 CDK10 LOC107984817 SPATA2L CENPBD1 MC1R TCF25 SPATA33 AFG3L1P ZNF276 DPEP1 SPIRE2 TUBB3 FANCA DBNDD1 VPS9D1 DEF8 CHMP1A
nsv516241 Chr.16:89696002 - 89723490 on Build GRCh38 Loss VPS9D1-AS1 CDK10 VPS9D1 SPATA2L ZNF276
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss GAS8-AS1 LOC105371419 ZNF778 CDK10 LOC107984817 TCF25 TUBB8P7 SPATA33 URAHP ZNF276 TUBB3 LOC105371414 LOC101927817 DBNDD1 PRDM7 CHMP1A GAS8 VPS9D1-AS1 LOC100287036 SPATA2L CENPBD1 MC1R SNORD68 ANKRD11 AFG3L1P DPEP1 SPIRE2 FANCA VPS9D1 DEF8 FAM157C CPNE7 SPG7 RPL13
nsv833330 Chr.16:89678466 - 89741783 on Build GRCh38 Loss VPS9D1-AS1 CDK10 FANCA VPS9D1 SPATA2L ZNF276
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss GAS8-AS1 LOC105371419 SLC22A31 ZNF778 CDK10 MVD ACSF3 TCF25 TUBB8P7 PIEZO1 LOC105371409 ZNF276 SNAI3 TUBB3 LOC105371414 LOC101927817 DBNDD1 IL17C VPS9D1-AS1 LINC00304 CENPBD1 MC1R SNORD68 LOC339059 ANKRD11 AFG3L1P DPEP1 CYBA SPIRE2 VPS9D1 DEF8 FAM157C LOC107987238 GALNS LOC107984817 SPATA33 URAHP CTU2 LOC101927793 CBFA2T3 PRDM7 CDH15 CHMP1A GAS8 LOC100287036 LOC100129697 CDT1 TRAPPC2L LOC100289580 RNF166 SNAI3-AS1 SPATA2L PABPN1L FANCA APRT CPNE7 LOC400558 MIR4722 SPG7 RPL13
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion VPS9D1-AS1 CDK10 SPATA2L SNORD68 SPATA33 ZNF276 DPEP1 FANCA VPS9D1 CHMP1A CPNE7 SPG7 RPL13

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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