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See other GNPTG CNV Assays ›
Gene Symbol
GNPTG
Assay Reference Genome
Location

Chr.16:1358083 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03937536_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
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Assay Details

Target Gene Details

Entrez Gene ID:

 84572

Gene Name:

 N-acetylglucosamine-1-phosphate transferase gamma subunit

Gene Aliases:

 C16orf27, GNPTAG, LP2537, RJD9

Location:

 Chr.16:1351899-1363351 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
XM_017023783.1 XP_016879272.1
AF302786.1 AAG27706.1
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
DT219524.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain CCDC154 UBE2I LOC105371045 GNPTG CLCN7 UNKL C16orf91 IFT140 BAIAP3 TSR3 PTX4 TELO2
dgv473e214 Chr.16:1356674 - 1364974 on Build GRCh38 Loss GNPTG UNKL
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RPUSD1 METRN NOXO1 MPG FLJ42627 NDUFB10 WDR24 LMF1 HAGH RHBDL1 SNHG19 FAM173A MIR6511B1 TMEM8A CACNA1H CEMP1 MIR4717 SNHG9 MIR4516 CRAMP1 LOC107987233 MIR3178 RAB26 C1QTNF8 TBC1D24 TBL3 NTHL1 POLR3K HAGHL NUBP2 MIR6859-4 ATP6V0C PRSS29P WFIKKN1 LOC652276 TSR3 NPRL3 PRR35 MAPK8IP3 LOC100134368 SNRNP25 PGP RNPS1 PDPK1 ZNF598 MCRIP2 ECI1 LUC7L LOC105371184 FAHD1 MIR3180-5 LOC107984876 MIR6767 TPSG1 MIR662 NTN3 ERVK13-1 CASKIN1 LOC101929280 ABCA17P HN1L SNORA64 MRPL28 NME3 UBE2I NARFL MSRB1 SOX8 CAPN15 SNORA10 CHTF18 CCNF BRICD5 DECR2 MEIOB CCDC78 RAB11FIP3 MIR3177 CCDC154 RPL3L LOC105371045 HS3ST6 LOC100287175 JMJD8 RGS11 FBXL16 BAIAP3 SSTR5-AS1 HBA1 TPSB2 LINC00235 TSC2 MIR6768 GNPTG SNORA78 EME2 HBQ1 RPS2 LOC105371046 MRPS34 AMDHD2 LMF1-AS1 NME4 TPSAB1 LINC00254 MIR940 SYNGR3 LOC105371049 MIR5587 IGFALS LOC106660606 TRAF7 LOC105371047 LOC105371038 SLC9A3R2 NHLRC4 SPSB3 NPW STUB1 C16orf59 RHBDF1 MIR3176 RHOT2 E4F1 PIGQ PTX4 MIR3677 HBM CLCN7 PRR25 UNKL METTL26 AXIN1 MIR1225 DNASE1L2 FAM234A GNG13 SNORD60 ABCA3 RNF151 PRSS27 KCTD5 WASIR2 HBA2 TMEM204 HBZ PKD1 GFER MLST8 TPSD1 TELO2 WDR90 MSLN DDX11L10 RAB40C C16orf91 ARHGDIG IFT140 LOC729652 SSTR5 RPL23AP5 PDIA2
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss CCDC154 UBE2I LOC105371045 LMF1 LMF1-AS1 BAIAP3 TPSAB1 SOX8 SSTR5-AS1 TPSD1 CACNA1H TPSB2 LOC107984876 TPSG1 GNPTG CLCN7 UNKL PRSS29P C16orf91 TSR3 C1QTNF8 SSTR5
esv2660383 Chr.16:1357638 - 1359039 on Build GRCh38 Deletion GNPTG
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain UBE2I BAIAP3 TPSAB1 SSTR5-AS1 TPSD1 CACNA1H TPSB2 TPSG1 GNPTG UNKL PRSS29P TSR3 C1QTNF8 SSTR5
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss UBE2I LMF1 LMF1-AS1 BAIAP3 TPSAB1 SOX8 SSTR5-AS1 TPSD1 CACNA1H TPSB2 TPSG1 GNPTG UNKL PRSS29P TSR3 C1QTNF8 SSTR5
esv2750333 Chr.16:1357628 - 1359067 on Build GRCh38 Deletion GNPTG
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion CCDC154 UBE2I LOC105371045 TMEM204 BAIAP3 TPSAB1 TPSD1 CACNA1H PTX4 TELO2 TPSB2 TPSG1 GNPTG CLCN7 LOC105371047 UNKL PRSS29P C16orf91 IFT140 TSR3
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss UBE2I GNPTG UNKL PRSS29P C16orf91 BAIAP3 TPSAB1 TSR3 TPSD1
esv3637616 Chr.16:1356693 - 1364925 on Build GRCh38 Gain GNPTG UNKL
esv3637617 Chr.16:1357700 - 1359042 on Build GRCh38 Loss GNPTG

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