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See other SULT1A1 CNV Assays ›
Gene Symbol
SULT1A1
Assay Reference Genome
Location

Chr.16:28618690 on build GRCh38
Cytoband
16p11.2
Assay ID Hs03939601_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6817

Gene Name:

 sulfotransferase family 1A member 1

Gene Aliases:

 HAST1/HAST2, P-PST, PST, ST1A1, ST1A3, STP, STP1, TSPST1

Location:

 Chr.16:28605587-28623586 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SULT1A1 NM_177536.3 NP_803880.1
XM_017023607.1 XP_016879096.1
XM_017023611.1 XP_016879100.1
XM_017023612.1 XP_016879101.1
XM_017023613.1 XP_016879102.1
AL558375.3
BC110887.1 AAI10888.1
BI459867.1
BI460081.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv509608 Chr.16:28449797 - 28632895 on Build GRCh38 Insertion SULT1A2 SULT1A1 NUPR1 APOBR SGF29 CLN3 IL27
dgv4972n54 Chr.16:28597166 - 28708113 on Build GRCh38 Loss SULT1A1 NPIPB8 EIF3C
nsv819128 Chr.16:28597886 - 28620160 on Build GRCh38 Loss SULT1A1
nsv571755 Chr.16:28598169 - 28700904 on Build GRCh38 Gain SULT1A1 NPIPB8 EIF3C
esv2758640 Chr.16:28163817 - 29139232 on Build GRCh38 Gain+Loss ATP2A1-AS1 XPO6 LOC101928215 RABEP2 ATXN2L RRN3P2 LAT SBK1 CLN3 ATP2A1 MIR4517 NPIPB6 CD19 TUFM EIF3CL SULT1A2 NFATC2IP SH2B1 NPIPB8 NPIPB9 SULT1A1 NUPR1 NPIP APOBR SPNS1 EIF3C MIR6862-1 SGF29 MIR6862-2 MIR4721 IL27
nsv1775 Chr.16:28595445 - 28619570 on Build GRCh38 Insertion SULT1A2 SULT1A1
nsv833182 Chr.16:28538055 - 28672127 on Build GRCh38 Gain SULT1A2 SULT1A1 NUPR1 NPIPB8 SGF29
nsv1059555 Chr.16:28373144 - 29195838 on Build GRCh38 Gain ATP2A1-AS1 LOC101928215 RABEP2 ATXN2L RRN3P2 LAT CLN3 ATP2A1 MIR4517 LOC107984832 CD19 TUFM EIF3CL SULT1A2 NFATC2IP SH2B1 NPIPB8 NPIPB9 SULT1A1 NUPR1 NPIP APOBR SPNS1 EIF3C MIR6862-1 SGF29 MIR6862-2 MIR4721 IL27
nsv977945 Chr.16:28615463 - 28627421 on Build GRCh38 Duplication SULT1A1
esv3892822 Chr.16:28604387 - 28620264 on Build GRCh38 Loss SULT1A1
nsv1066415 Chr.16:28581736 - 28826752 on Build GRCh38 Gain SULT1A2 SULT1A1 NPIPB8 ATXN2L NPIPB9 EIF3C SGF29 MIR6862-2

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More Information


Important Information

Individuals may carry null alleles or extra copies of SULT1A1. Hs03939601_cn specifically targets SULT1A1 intron 2 sequences but lies 5' to the major segmental duplication breakpoint and does not detect most SULT1A1 CNV events.

Additional Information:

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation Validated

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Function(s) Process(es)


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