Hs03941092_cn

• Gene Symbol: LOC105371419
• Assay Reference Genome Location: Chr.16:89849552 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 105371419
• Gene Name: uncharacterized LOC105371419
• Gene Aliases: -
• Location: Chr.16:89846857-89854277 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC105371419	XM_011523522.2	2	1322	XP_011521824.1

Target Gene Details

• Entrez Gene ID: 84501
• Gene Name: spire type actin nucleation factor 2
• Gene Aliases: Spir-2
• Location: Chr.16:89817477-89871319 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPIRE2	NM_032451.1			NP_115827.1
	XM_011523379.1			XP_011521681.1
	XM_011523380.2			XP_011521682.1
	XM_011523381.1			XP_011521683.1
	XM_011523384.1			XP_011521686.1
	XM_011523385.1			XP_011521687.1
	XM_017023779.1			XP_016879268.1
	XM_017023780.1			XP_016879269.1
	XM_017023781.1			XP_016879270.1
	AJ422077.1			CAD19439.1
	AL834408.1			CAD39070.1
	BC111030.1			AAI11031.1
	BX439688.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv573744	Chr.16:89738447 - 89915950 on Build GRCh38	Loss	SPIRE2 LOC105371419 FANCA LOC107984817 ZNF276 TCF25
esv3639601	Chr.16:89845985 - 89862110 on Build GRCh38	Loss	SPIRE2 LOC105371419
esv2758671	Chr.16:89804324 - 89901541 on Build GRCh38	Loss	SPIRE2 LOC105371419 FANCA LOC107984817 TCF25
nsv573743	Chr.16:89664419 - 89853617 on Build GRCh38	Gain	SPATA33 SPIRE2 LOC105371419 FANCA LOC107984817 VPS9D1 CDK10 ZNF276 VPS9D1-AS1 SPATA2L
esv2762221	Chr.16:89610380 - 90039318 on Build GRCh38	Gain+Loss	LOC105371419 MC1R GAS8-AS1 CENPBD1 VPS9D1 CDK10 SPATA2L DEF8 TCF25 TUBB3 SPATA33 SPIRE2 AFG3L1P DBNDD1 CHMP1A GAS8 DPEP1 FANCA LOC107984817 ZNF276 VPS9D1-AS1
nsv428331	Chr.16:89216635 - 90185980 on Build GRCh38	Gain+Loss	FAM157C URAHP SNORD68 TUBB8P7 LOC105371414 ZNF778 MC1R RPL13 TCF25 SPATA33 DBNDD1 CPNE7 CHMP1A LOC100287036 SPG7 GAS8 DPEP1 FANCA LOC105371419 GAS8-AS1 CENPBD1 ANKRD11 VPS9D1 CDK10 SPATA2L PRDM7 DEF8 TUBB3 SPIRE2 AFG3L1P LOC107984817 ZNF276 VPS9D1-AS1 LOC101927817
nsv833331	Chr.16:89726091 - 89849806 on Build GRCh38	Gain+Loss	SPIRE2 LOC105371419 FANCA LOC107984817 ZNF276
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	FAM157C SNORD68 TUBB8P7 LOC105371414 LOC100129697 ZNF778 LOC107987238 PABPN1L TCF25 LOC100289580 CHMP1A SPG7 GAS8 APRT DPEP1 CBFA2T3 GAS8-AS1 VPS9D1 LOC400558 SPATA2L DEF8 CYBA CDH15 SPIRE2 MVD LINC00304 CTU2 GALNS VPS9D1-AS1 LOC339059 SLC22A31 MIR4722 URAHP MC1R TRAPPC2L RPL13 ACSF3 SPATA33 DBNDD1 CPNE7 LOC100287036 LOC105371409 FANCA SNAI3 RNF166 PIEZO1 CDT1 LOC105371419 CENPBD1 ANKRD11 CDK10 IL17C PRDM7 TUBB3 AFG3L1P LOC107984817 LOC101927793 ZNF276 LOC101927817 SNAI3-AS1

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

actin or actin-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

protein transport
vesicle-mediated transport
actin cytoskeleton organization
cleavage furrow formation
polar body extrusion after meiotic divisions
actin nucleation
intracellular transport
establishment of meiotic spindle localization
formin-nucleated actin cable assembly

Function(s)

actin binding