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Gene Symbol
TLDC1
Assay Reference Genome
Location

Chr.16:84485439 on build GRCh38
Cytoband
16q24.1
Assay ID Hs03943037_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57707

Gene Name:

 TBC/LysM-associated domain containing 1

Gene Aliases:

 KIAA1609

Location:

 Chr.16:84476355-84504752 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TLDC1 NM_020947.3 NP_065998.3
XM_005256074.3 XP_005256131.1
XM_005256075.2 XP_005256132.1
XM_006721240.2 XP_006721303.1
XM_011523248.2 XP_011521550.1
XM_011523249.2 XP_011521551.1
XM_017023510.1 XP_016878999.1
XM_017023511.1 XP_016879000.1
XM_017023512.1 XP_016879001.1
AK291237.1
AK297241.1
AK300132.1
AK310887.1
BC023251.1 AAH23251.1
BC060844.1 AAH60844.1
BM715579.1
BU955954.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1061004 Chr.16:84405376 - 84561748 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
nsv1065249 Chr.16:84435765 - 84556540 on Build GRCh38 Gain TLDC1 LOC105371374 ATP2C2
esv3892928 Chr.16:84339110 - 84524557 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
nsv573425 Chr.16:84298994 - 84575953 on Build GRCh38 Loss WFDC1 TLDC1 COTL1 LOC105371374 ATP2C2
nsv1064308 Chr.16:84461124 - 84592674 on Build GRCh38 Loss TLDC1 COTL1 LOC105371374 ATP2C2
esv3639429 Chr.16:84472177 - 84518552 on Build GRCh38 Gain TLDC1
dgv3057n100 Chr.16:84378422 - 84500091 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain KCNG4 FOXF1 EMC8 GSE1 LOC101928614 WFDC1 KLHL36 COTL1 LOC105371374 ATP2C2 LINC00311 COX4I1 LOC400548 FOXC2 TLDC1 USP10 LINC00917 TAF1C KIAA0513 FOXC2-AS1 LINC01081 MIR1910 GINS2 FAM92B MTHFSD LOC102724344 DNAAF1 LOC440390 LOC146513 IRF8 MIR6774 LOC101928474 MIR5093 LINC01082 FOXL1 LOC101928557 FENDRR ZDHHC7 ADAD2 CRISPLD2 C16orf74 LOC105376777 FLJ30679
nsv573454 Chr.16:84468700 - 84512067 on Build GRCh38 Loss TLDC1
nsv1059640 Chr.16:84338790 - 84543759 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
dgv5262n54 Chr.16:84381903 - 84583279 on Build GRCh38 Loss TLDC1 COTL1 LOC105371374 ATP2C2
nsv573430 Chr.16:84387654 - 84501190 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
dgv549e214 Chr.16:84434443 - 84555604 on Build GRCh38 Gain TLDC1 LOC105371374 ATP2C2
nsv1058049 Chr.16:84481312 - 84543759 on Build GRCh38 Loss TLDC1

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More Information


Additional Information:

For this assay, SNP(s) [rs111717757] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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