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See other CACNA1H CNV Assays ›
Gene Symbol
CACNA1H
Assay Reference Genome
Location

Chr.16:1160152 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03943364_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8912

Gene Name:

 calcium voltage-gated channel subunit alpha1 H

Gene Aliases:

 CACNA1HB, Cav3.2, ECA6, EIG6

Location:

 Chr.16:1153241-1221772 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CACNA1H NM_001005407.1 NP_001005407.1
NM_021098.2 NP_066921.2
XM_005255652.4 XP_005255709.1
XM_006720963.3 XP_006721026.1
XM_006720964.3 XP_006721027.1
XM_006720965.3 XP_006721028.1
XM_006720967.3 XP_006721030.1
XM_006720968.3 XP_006721031.1
XM_011522727.2 XP_011521029.1
XM_017023819.1 XP_016879308.1
XM_017023820.1 XP_016879309.1
XM_017023821.1 XP_016879310.1
AF051946.3 AAC67239.3
AF073931.1 AAD17668.1
AJ420779.1 CAD12646.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain SSTR5-AS1 C1QTNF8 SSTR5 LMF1 CACNA1H SOX8 LOC107984876 LMF1-AS1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC101929280 PRR35 HS3ST6 TMEM204 TSR3 CACNA1H MIR4717 NME4 LOC105371045 DECR2 GNPTG WASIR2 LINC00235 C1QTNF8 MRPL28 NPRL3 LINC00254 LOC105371047 MIR6767 PIGQ MIR3180-5 METTL26 E4F1 METRN RPL3L MPG TELO2 LOC105371049 RHBDL1 CCNF HBQ1 ABCA3 MCRIP2 SLC9A3R2 FAM234A LMF1 NME3 RGS11 ERVK13-1 SNORA10 CRAMP1 MAPK8IP3 TRAF7 PGP MEIOB AXIN1 LMF1-AS1 MIR4516 MRPS34 RAB40C TBL3 RPL23AP5 SPSB3 RPUSD1 RAB11FIP3 LOC107987233 GNG13 KCTD5 LOC107984876 TMEM8A HBM ZNF598 SSTR5 WDR24 CASKIN1 TPSD1 PRSS27 SYNGR3 SOX8 SNHG9 SSTR5-AS1 MLST8 SNRNP25 STUB1 CLCN7 WDR90 IFT140 HAGH UBE2I TPSG1 DDX11L10 NUBP2 MIR662 TBC1D24 NPW TPSB2 ARHGDIG CCDC154 SNORD60 UNKL SNHG19 BRICD5 LOC106660606 MIR3176 MIR6768 LOC100287175 EME2 JMJD8 FLJ42627 MIR5587 NARFL RPS2 ABCA17P GFER NDUFB10 ATP6V0C RHBDF1 C16orf59 NTN3 PKD1 CHTF18 HBZ LOC100134368 PRSS29P MIR6859-4 HN1L RNF151 MSLN LOC105371184 LOC105371038 DNASE1L2 SNORA64 LOC105371046 MIR940 RAB26 MIR6511B1 HAGHL PRR25 MIR1225 FAHD1 LOC729652 CCDC78 LOC652276 CAPN15 PTX4 NHLRC4 POLR3K SNORA78 WFIKKN1 RNPS1 FAM173A FBXL16 MSRB1 MIR3677 BAIAP3 NTHL1 C16orf91 TSC2 CEMP1 PDPK1 HBA1 MIR3178 HBA2 MIR3177 NOXO1 AMDHD2 ECI1 LUC7L RHOT2 PDIA2 TPSAB1 IGFALS
nsv571101 Chr.16:1078406 - 1287716 on Build GRCh38 Gain SSTR5-AS1 C1QTNF8 SSTR5 TPSG1 PRSS29P CACNA1H TPSD1 TPSAB1 TPSB2
nsv471067 Chr.16:997728 - 1220162 on Build GRCh38 Gain SSTR5-AS1 C1QTNF8 SSTR5 CACNA1H
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss SSTR5-AS1 CCDC154 UNKL TSR3 CACNA1H CLCN7 C16orf91 LOC105371045 GNPTG LOC107984876 C1QTNF8 SSTR5 UBE2I TPSG1 LMF1 PRSS29P TPSD1 BAIAP3 SOX8 LMF1-AS1 TPSAB1 TPSB2
dgv2691n100 Chr.16:1002943 - 1247707 on Build GRCh38 Gain SSTR5-AS1 C1QTNF8 SSTR5 TPSG1 CACNA1H TPSAB1 TPSB2
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss SSTR5-AS1 UNKL TSR3 CACNA1H GNPTG C1QTNF8 SSTR5 UBE2I TPSG1 LMF1 PRSS29P TPSD1 BAIAP3 SOX8 LMF1-AS1 TPSAB1 TPSB2
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion CCDC154 TMEM204 UNKL TELO2 TSR3 CACNA1H CLCN7 C16orf91 LOC105371045 GNPTG PTX4 IFT140 UBE2I TPSG1 LOC105371047 PRSS29P TPSD1 BAIAP3 TPSAB1 TPSB2
nsv1160327 Chr.16:1063695 - 1222472 on Build GRCh38 Deletion SSTR5-AS1 C1QTNF8 SSTR5 TPSG1 CACNA1H
dgv4841n54 Chr.16:1142213 - 1220162 on Build GRCh38 Loss CACNA1H
nsv457326 Chr.16:1148938 - 1220162 on Build GRCh38 Loss CACNA1H
nsv571102 Chr.16:1084818 - 1257675 on Build GRCh38 Loss C1QTNF8 TPSG1 CACNA1H TPSD1 TPSAB1 TPSB2

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