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Gene Symbol
TLDC1
Assay Reference Genome
Location

Chr.16:84488003 on build GRCh38
Cytoband
16q24.1
Assay ID Hs03944875_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57707

Gene Name:

 TBC/LysM-associated domain containing 1

Gene Aliases:

 KIAA1609

Location:

 Chr.16:84476355-84504752 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TLDC1 NM_020947.3 NP_065998.3
XM_005256074.3 XP_005256131.1
XM_005256075.2 XP_005256132.1
XM_006721240.2 XP_006721303.1
XM_011523248.2 XP_011521550.1
XM_011523249.2 XP_011521551.1
XM_017023510.1 XP_016878999.1
XM_017023511.1 XP_016879000.1
XM_017023512.1 XP_016879001.1
AK021995.1 1 434
AK291237.1
AK300132.1
AK310887.1
BC023251.1 AAH23251.1
BC060844.1 AAH60844.1
BI767086.1
BU955954.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1065249 Chr.16:84435765 - 84556540 on Build GRCh38 Gain TLDC1 LOC105371374 ATP2C2
nsv1061004 Chr.16:84405376 - 84561748 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
esv3892928 Chr.16:84339110 - 84524557 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
nsv573425 Chr.16:84298994 - 84575953 on Build GRCh38 Loss TLDC1 COTL1 LOC105371374 WFDC1 ATP2C2
nsv1064308 Chr.16:84461124 - 84592674 on Build GRCh38 Loss TLDC1 COTL1 LOC105371374 ATP2C2
esv3639429 Chr.16:84472177 - 84518552 on Build GRCh38 Gain TLDC1
dgv3057n100 Chr.16:84378422 - 84500091 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain CRISPLD2 TAF1C GINS2 FOXF1 IRF8 MIR1910 LINC00311 ADAD2 MIR6774 DNAAF1 FOXC2-AS1 LOC101928557 FLJ30679 GSE1 LINC01082 FOXL1 KLHL36 ZDHHC7 LOC101928474 FENDRR EMC8 WFDC1 LOC400548 FOXC2 LOC105376777 LOC146513 LINC01081 KIAA0513 C16orf74 KCNG4 FAM92B LOC101928614 USP10 LOC102724344 LINC00917 MTHFSD COX4I1 TLDC1 COTL1 LOC105371374 ATP2C2 MIR5093 LOC440390
nsv573454 Chr.16:84468700 - 84512067 on Build GRCh38 Loss TLDC1
nsv1059640 Chr.16:84338790 - 84543759 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
dgv5262n54 Chr.16:84381903 - 84583279 on Build GRCh38 Loss TLDC1 COTL1 LOC105371374 ATP2C2
nsv573430 Chr.16:84387654 - 84501190 on Build GRCh38 Loss TLDC1 LOC105371374 ATP2C2
nsv1058049 Chr.16:84481312 - 84543759 on Build GRCh38 Loss TLDC1
dgv549e214 Chr.16:84434443 - 84555604 on Build GRCh38 Gain TLDC1 LOC105371374 ATP2C2

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More Information


Additional Information:

For this assay, SNP(s) [rs80183455] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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