Hs03945624_cn

• Gene Symbol: LOC105371419
• Assay Reference Genome Location: Chr.16:89853105 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 105371419
• Gene Name: uncharacterized LOC105371419
• Gene Aliases: -
• Location: Chr.16:89846857-89854277 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC105371419	XM_011523522.2			XP_011521824.1

Target Gene Details

• Entrez Gene ID: 84501
• Gene Name: spire type actin nucleation factor 2
• Gene Aliases: Spir-2
• Location: Chr.16:89817477-89871319 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPIRE2	NM_032451.1			NP_115827.1
	XM_011523379.1			XP_011521681.1
	XM_011523380.2			XP_011521682.1
	XM_011523381.1			XP_011521683.1
	XM_011523384.1			XP_011521686.1
	XM_011523385.1			XP_011521687.1
	XM_017023779.1			XP_016879268.1
	XM_017023780.1			XP_016879269.1
	XM_017023781.1			XP_016879270.1
	AB058735.1			BAB47461.1
	AJ422077.1			CAD19439.1
	AL834408.1			CAD39070.1
	BC111030.1			AAI11031.1
	BC139732.1
	BX439688.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv573744	Chr.16:89738447 - 89915950 on Build GRCh38	Loss	LOC105371419 ZNF276 SPIRE2 LOC107984817 FANCA TCF25
esv3639601	Chr.16:89845985 - 89862110 on Build GRCh38	Loss	LOC105371419 SPIRE2
dgv5334n54	Chr.16:89852237 - 89853617 on Build GRCh38	Loss	LOC105371419 SPIRE2
esv2758671	Chr.16:89804324 - 89901541 on Build GRCh38	Loss	LOC105371419 SPIRE2 LOC107984817 FANCA TCF25
nsv573743	Chr.16:89664419 - 89853617 on Build GRCh38	Gain	SPATA2L LOC105371419 ZNF276 SPIRE2 VPS9D1-AS1 VPS9D1 LOC107984817 FANCA SPATA33 CDK10
esv2762221	Chr.16:89610380 - 90039318 on Build GRCh38	Gain+Loss	DPEP1 LOC105371419 ZNF276 SPIRE2 VPS9D1-AS1 VPS9D1 GAS8 LOC107984817 AFG3L1P SPATA33 SPATA2L GAS8-AS1 CENPBD1 DEF8 CHMP1A FANCA DBNDD1 TCF25 CDK10 TUBB3 MC1R
nsv428331	Chr.16:89216635 - 90185980 on Build GRCh38	Gain+Loss	LOC100287036 ZNF276 VPS9D1-AS1 SPG7 LOC105371414 AFG3L1P SPATA2L PRDM7 CENPBD1 DEF8 CHMP1A FAM157C FANCA RPL13 TCF25 ANKRD11 MC1R SNORD68 DPEP1 LOC105371419 SPIRE2 TUBB8P7 VPS9D1 GAS8 LOC107984817 SPATA33 LOC101927817 ZNF778 CPNE7 GAS8-AS1 DBNDD1 CDK10 URAHP TUBB3
nsv573798	Chr.16:89852186 - 89853617 on Build GRCh38	Gain+Loss	LOC105371419 SPIRE2
nsv573791	Chr.16:89851129 - 89853617 on Build GRCh38	Loss	LOC105371419 SPIRE2
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	LOC100289580 CDH15 APRT LOC100287036 MIR4722 CBFA2T3 TRAPPC2L MVD AFG3L1P SNAI3 SPATA2L LOC107987238 CDT1 PRDM7 DEF8 CHMP1A FAM157C TCF25 SNORD68 DPEP1 SNAI3-AS1 SPIRE2 VPS9D1 IL17C GAS8 LOC107984817 LOC101927817 CTU2 PIEZO1 ZNF778 CPNE7 GAS8-AS1 DBNDD1 URAHP TUBB3 LINC00304 PABPN1L ZNF276 VPS9D1-AS1 SPG7 LOC105371414 LOC101927793 LOC400558 LOC339059 SLC22A31 RNF166 ACSF3 CENPBD1 LOC105371409 FANCA RPL13 CYBA ANKRD11 MC1R LOC105371419 LOC100129697 TUBB8P7 SPATA33 GALNS CDK10

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

actin or actin-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

protein transport
vesicle-mediated transport
actin cytoskeleton organization
cleavage furrow formation
polar body extrusion after meiotic divisions
actin nucleation
intracellular transport
establishment of meiotic spindle localization
formin-nucleated actin cable assembly

Function(s)

actin binding