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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89509655 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03946022_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC036104.1 AAH36104.1
BI827568.1
DA770435.1
DB482451.1
HY006239.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain CPNE7 ANKRD11 SNORD68 SPG7 RPL13 LOC101927817
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss LOC107984817 SPIRE2 VPS9D1 ZNF276 RPL13 LOC101927817 LOC100287036 MC1R FAM157C LOC105371414 VPS9D1-AS1 CPNE7 TUBB8P7 SPATA2L DEF8 ANKRD11 DPEP1 CDK10 TUBB3 GAS8 SPATA33 TCF25 DBNDD1 SPG7 CENPBD1 PRDM7 FANCA URAHP CHMP1A SNORD68 GAS8-AS1 AFG3L1P LOC105371419 ZNF778
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain CPNE7 ANKRD11 SNORD68 SPG7 RPL13 LOC101927817
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SPATA33 CHMP1A CPNE7 ANKRD11 DPEP1 SNORD68 SPG7 RPL13 LOC101927817
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC107984817 CTU2 SPIRE2 VPS9D1 ZNF276 LOC100289580 LOC100129697 LOC101927817 LOC100287036 FAM157C CBFA2T3 LOC105371414 SPATA2L TRAPPC2L ANKRD11 MIR4722 DPEP1 GALNS SPATA33 PABPN1L DBNDD1 SPG7 CENPBD1 PRDM7 CHMP1A LOC339059 SNORD68 GAS8-AS1 AFG3L1P SNAI3-AS1 LOC105371419 ZNF778 LOC105371409 CDH15 APRT RNF166 RPL13 MC1R CYBA VPS9D1-AS1 CPNE7 TUBB8P7 DEF8 LINC00304 CDK10 TUBB3 GAS8 ACSF3 LOC400558 SLC22A31 TCF25 SNAI3 IL17C MVD PIEZO1 FANCA URAHP CDT1 LOC107987238 LOC101927793

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