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See other LMF1 CNV Assays ›
Gene Symbol
LMF1
Assay Reference Genome
Location

Chr.16:932344 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03948021_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 64788

Gene Name:

 lipase maturation factor 1

Gene Aliases:

 C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A

Location:

 Chr.16:853632-981615 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1 NM_022773.2 NP_073610.2
NR_033645.1
NR_033646.1
XM_006720928.2 XP_006720991.1
XM_006720929.3 XP_006720992.1
XM_011522614.2 XP_011520916.1
XM_011522615.1 XP_011520917.1
XM_011522618.2 XP_011520920.1
XM_017023575.1 XP_016879064.1
XM_017023576.1 XP_016879065.1
XM_017023577.1 XP_016879066.1
XM_017023578.1 XP_016879067.1
XM_017023579.1 XP_016879068.1
XM_017023580.1 XP_016879069.1
XM_017023581.1 XP_016879070.1
AB075873.1 BAD38655.1
AK022743.1 BAB14218.1
AK025955.1 BAB15295.1
AK093050.1
AK125201.1
AK225065.1
AK225406.1
AK294329.1
AK294932.1
BC010738.1 AAH10738.2
DA200865.1

Target Gene Details

Entrez Gene ID:

 101929387

Gene Name:

 LMF1 antisense RNA 1

Gene Aliases:

 LA16c-366D3.1

Location:

 Chr.16:921033-934524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1-AS1 NR_110945.1
NR_110946.1
BM547968.1
BX397433.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571049 Chr.16:929006 - 945894 on Build GRCh38 Loss LMF1 LMF1-AS1
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain LOC107984876 C1QTNF8 CACNA1H LMF1 SSTR5-AS1 SOX8 LMF1-AS1 SSTR5
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication C16orf59 MIR6511B1 E4F1 RAB11FIP3 SNORA10 DECR2 MIR1225 WASIR2 UNKL MLST8 HBZ HS3ST6 LOC105371038 IFT140 RPL3L NOXO1 MSLN LOC100287175 LOC105371047 RAB26 PGP BAIAP3 NME4 MEIOB CCDC154 PDIA2 MRPL28 HBQ1 PRR35 MIR940 EME2 RPUSD1 ARHGDIG TMEM204 ATP6V0C LOC100134368 RNPS1 ABCA3 RAB40C BRICD5 LOC105371184 TMEM8A TPSB2 WDR24 AXIN1 RPS2 MIR3180-5 UBE2I MIR4516 PRSS29P CCDC78 TPSAB1 SNORD60 NHLRC4 WDR90 LOC105371049 TELO2 MIR3677 LINC00235 SSTR5-AS1 MIR6767 CCNF CRAMP1 PDPK1 ECI1 CLCN7 DNASE1L2 NDUFB10 LOC107984876 LUC7L ZNF598 RHOT2 TRAF7 CASKIN1 FAM234A MCRIP2 JMJD8 NUBP2 SNHG9 TPSG1 PRSS27 PKD1 HBA2 MIR5587 LOC729652 RPL23AP5 TSR3 NPW FBXL16 NTHL1 LOC652276 CAPN15 LOC101929280 LOC107987233 PTX4 SLC9A3R2 RHBDL1 ABCA17P METRN GNPTG MIR3176 METTL26 PRR25 KCTD5 MIR3177 TPSD1 STUB1 SOX8 SNORA78 FAHD1 MIR6768 LOC106660606 MIR662 TBL3 RGS11 DDX11L10 NME3 NTN3 MIR6859-4 TBC1D24 MAPK8IP3 AMDHD2 LOC105371046 HAGH LMF1-AS1 HN1L MSRB1 MIR3178 LINC00254 RHBDF1 CHTF18 LMF1 HBA1 SNORA64 TSC2 NPRL3 MPG RNF151 PIGQ CEMP1 ERVK13-1 MIR4717 FLJ42627 WFIKKN1 C1QTNF8 CACNA1H SPSB3 FAM173A SYNGR3 GFER LOC105371045 GNG13 IGFALS SNHG19 HBM MRPS34 SNRNP25 POLR3K NARFL SSTR5 HAGHL C16orf91
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss GNPTG BAIAP3 LOC107984876 C1QTNF8 CACNA1H UBE2I TSR3 TPSD1 CCDC154 PRSS29P SOX8 TPSAB1 LMF1-AS1 LOC105371045 UNKL LMF1 SSTR5-AS1 TPSG1 SSTR5 TPSB2 CLCN7 C16orf91
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss GNPTG BAIAP3 C1QTNF8 CACNA1H UBE2I TSR3 TPSD1 PRSS29P SOX8 TPSAB1 LMF1-AS1 UNKL LMF1 SSTR5-AS1 TPSG1 SSTR5 TPSB2
nsv1046349 Chr.16:819378 - 942590 on Build GRCh38 Loss LOC107984876 LMF1 LMF1-AS1
nsv1042868 Chr.16:881686 - 966057 on Build GRCh38 Loss LOC107984876 LMF1 LMF1-AS1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion CCDC78 RAB11FIP3 LMF1-AS1 NHLRC4 WDR90 FBXL16 CAPN15 LOC101929280 LINC00235 CHTF18 LOC107987233 LMF1 SSTR5-AS1 LOC105371038 RHBDL1 MSLN LOC100287175 PIGQ METRN MIR3176 WFIKKN1 LOC107984876 METTL26 PRR25 C1QTNF8 STUB1 SOX8 FAM173A RHOT2 PRR35 GNG13 MCRIP2 MIR662 RPUSD1 JMJD8 NARFL RAB40C SSTR5 LOC105371184 HAGHL WDR24 MIR5587
nsv457316 Chr.16:884180 - 933163 on Build GRCh38 Loss LOC107984876 LMF1 LMF1-AS1

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