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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89528022 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03948659_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC035929.2 AAH35929.1
BC036104.1 AAH36104.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain SPG7 RPL13 SNORD68 ANKRD11 CPNE7 LOC101927817
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss DEF8 DPEP1 GAS8 ZNF778 PRDM7 ANKRD11 CHMP1A LOC101927817 LOC105371419 TUBB8P7 SPATA2L TCF25 VPS9D1 MC1R LOC100287036 DBNDD1 AFG3L1P FAM157C URAHP CPNE7 SPATA33 LOC105371414 SPG7 FANCA CDK10 ZNF276 SPIRE2 GAS8-AS1 VPS9D1-AS1 CENPBD1 LOC107984817 RPL13 SNORD68 TUBB3
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain SPG7 RPL13 SNORD68 ANKRD11 CPNE7 LOC101927817
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain SPG7 DPEP1 RPL13 SNORD68 ANKRD11 CPNE7 CHMP1A LOC101927817 SPATA33
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DEF8 LOC105371409 PIEZO1 GAS8 ACSF3 CDH15 TUBB8P7 SPATA2L LOC400558 VPS9D1 LOC100287036 DBNDD1 AFG3L1P FAM157C URAHP CPNE7 LOC339059 LOC107987238 LOC105371414 SPG7 CYBA SPIRE2 SNAI3 RPL13 SNORD68 TUBB3 LOC100289580 SNAI3-AS1 CDT1 PABPN1L DPEP1 TRAPPC2L MVD ZNF778 PRDM7 IL17C ANKRD11 CHMP1A LOC101927817 LOC100129697 LOC105371419 GALNS MIR4722 TCF25 LOC101927793 MC1R RNF166 SPATA33 CBFA2T3 FANCA CDK10 ZNF276 GAS8-AS1 VPS9D1-AS1 CENPBD1 LOC107984817 LINC00304 APRT SLC22A31 CTU2
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SPG7 FANCA DPEP1 CDK10 ZNF276 CHMP1A VPS9D1-AS1 SPATA2L VPS9D1 RPL13 SNORD68 CPNE7 SPATA33

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