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See other GNPTG CNV Assays ›
Gene Symbol
GNPTG
Assay Reference Genome
Location

Chr.16:1355595 on build GRCh38
Cytoband
16p13.3
Assay ID Hs03948765_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84572

Gene Name:

 N-acetylglucosamine-1-phosphate transferase gamma subunit

Gene Aliases:

 C16orf27, GNPTAG, LP2537, RJD9

Location:

 Chr.16:1351899-1363351 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
AF302786.1 AAG27706.1
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
DT219524.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain CCDC154 PTX4 UNKL IFT140 BAIAP3 GNPTG C16orf91 TELO2 CLCN7 TSR3 UBE2I LOC105371045
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication LOC100287175 TMEM204 HBA1 NARFL BRICD5 LOC105371038 DDX11L10 TBC1D24 LOC652276 LINC00254 HN1L RPUSD1 PRSS29P C16orf59 LOC107984876 LMF1-AS1 PDPK1 EME2 LOC105371184 MIR3176 LOC729652 SNORD60 SNHG9 DNASE1L2 BAIAP3 RNF151 MIR1225 HBZ HBA2 HBM METTL26 MIR3177 SNORA78 MPG RPL23AP5 CLCN7 RHBDL1 ATP6V0C MIR6767 NHLRC4 IFT140 MIR3178 WASIR2 FBXL16 SYNGR3 RHOT2 NME3 CCDC154 RAB26 CCNF FAHD1 MIR6511B1 IGFALS LUC7L ABCA17P MIR662 LMF1 MSLN FAM234A LOC101929280 CHTF18 CAPN15 LOC100134368 HS3ST6 ECI1 RNPS1 RPL3L MIR3180-5 NOXO1 STUB1 NPRL3 RPS2 TRAF7 METRN MIR4717 NUBP2 PTX4 MRPL28 MEIOB PIGQ GNPTG TPSB2 ABCA3 RHBDF1 SNORA64 SSTR5-AS1 TPSAB1 HAGHL WFIKKN1 FAM173A AXIN1 GNG13 LINC00235 NME4 SNRNP25 SNHG19 UNKL SLC9A3R2 MCRIP2 SOX8 LOC105371045 MIR940 MIR6859-4 HBQ1 HAGH LOC105371046 LOC105371049 MRPS34 TELO2 GFER PGP TSR3 LOC106660606 CEMP1 PDIA2 POLR3K NTHL1 NPW MLST8 CASKIN1 MIR3677 UBE2I MAPK8IP3 NDUFB10 C1QTNF8 MSRB1 LOC107987233 E4F1 SNORA10 C16orf91 ZNF598 CRAMP1 WDR24 ERVK13-1 TSC2 ARHGDIG WDR90 DECR2 AMDHD2 PRR25 PKD1 NTN3 LOC105371047 TPSD1 SPSB3 PRSS27 TMEM8A RAB11FIP3 MIR4516 SSTR5 CACNA1H JMJD8 TPSG1 RGS11 CCDC78 KCTD5 TBL3 MIR5587 RAB40C MIR6768 FLJ42627 PRR35
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss CCDC154 LMF1-AS1 UNKL GNPTG TPSB2 CLCN7 SOX8 TPSD1 UBE2I LOC105371045 LMF1 SSTR5-AS1 C1QTNF8 TPSAB1 SSTR5 CACNA1H TPSG1 BAIAP3 PRSS29P C16orf91 TSR3 LOC107984876
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain UNKL GNPTG TPSB2 TPSD1 UBE2I SSTR5-AS1 C1QTNF8 TPSAB1 SSTR5 CACNA1H TPSG1 BAIAP3 PRSS29P TSR3
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss LMF1-AS1 UNKL GNPTG TPSB2 SOX8 TPSD1 UBE2I LMF1 SSTR5-AS1 C1QTNF8 TPSAB1 SSTR5 CACNA1H TPSG1 BAIAP3 PRSS29P TSR3
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion CCDC154 PTX4 UNKL TMEM204 GNPTG TPSB2 CLCN7 LOC105371047 TPSD1 UBE2I LOC105371045 TPSAB1 CACNA1H IFT140 TPSG1 BAIAP3 PRSS29P C16orf91 TELO2 TSR3
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss UNKL BAIAP3 PRSS29P GNPTG C16orf91 TSR3 TPSD1 UBE2I TPSAB1

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