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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89523208 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03948793_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
AF090912.1 1 489 AAF24033.1
BC035929.2 AAH35929.1
BC036104.1 AAH36104.1
BI827568.1
HY006239.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639586 Chr.16:89514722 - 89527655 on Build GRCh38 Gain SPG7
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain LOC101927817 SNORD68 ANKRD11 SPG7 CPNE7 RPL13
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss SPATA2L MC1R DBNDD1 CHMP1A VPS9D1 TUBB8P7 VPS9D1-AS1 SPG7 SPATA33 DEF8 AFG3L1P FAM157C SNORD68 ANKRD11 ZNF276 TCF25 GAS8 CENPBD1 LOC105371414 LOC107984817 CPNE7 RPL13 DPEP1 CDK10 LOC101927817 LOC100287036 LOC105371419 ZNF778 FANCA PRDM7 TUBB3 URAHP SPIRE2 GAS8-AS1
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain LOC101927817 SNORD68 ANKRD11 SPG7 CPNE7 RPL13
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain CHMP1A LOC101927817 SNORD68 ANKRD11 SPG7 SPATA33 CPNE7 RPL13 DPEP1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SPATA2L MC1R LOC400558 VPS9D1 SNAI3-AS1 TUBB8P7 VPS9D1-AS1 SPG7 SPATA33 DEF8 IL17C SNORD68 ANKRD11 APRT ZNF276 TCF25 MVD LOC100289580 CENPBD1 CTU2 LOC105371414 LOC339059 CDH15 DPEP1 LOC107987238 LOC105371419 ZNF778 PRDM7 TUBB3 PIEZO1 LOC105371409 TRAPPC2L GAS8-AS1 DBNDD1 CHMP1A LOC100129697 CBFA2T3 CYBA GALNS RNF166 AFG3L1P LOC101927793 FAM157C PABPN1L GAS8 LINC00304 LOC107984817 MIR4722 CPNE7 RPL13 CDK10 LOC101927817 LOC100287036 SNAI3 FANCA SLC22A31 CDT1 ACSF3 URAHP SPIRE2
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion SPATA2L CHMP1A VPS9D1 VPS9D1-AS1 SPG7 SPATA33 CPNE7 RPL13 DPEP1 CDK10 SNORD68 FANCA ZNF276

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