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Gene Symbol
TLDC1
Assay Reference Genome
Location

Chr.16:84497193 on build GRCh38
Cytoband
16q24.1
Assay ID Hs03948896_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57707

Gene Name:

 TBC/LysM-associated domain containing 1

Gene Aliases:

 KIAA1609

Location:

 Chr.16:84476355-84504752 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TLDC1 NM_020947.3 NP_065998.3
XM_005256074.3 XP_005256131.1
XM_005256075.2 XP_005256132.1
XM_006721240.2 XP_006721303.1
XM_011523248.2 XP_011521550.1
XM_011523249.2 XP_011521551.1
XM_017023510.1 XP_016878999.1
XM_017023511.1 XP_016879000.1
XM_017023512.1 XP_016879001.1
AK291237.1
AK300132.1
AK310887.1
BC023251.1 AAH23251.1
BC060844.1 AAH60844.1
BI767086.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1065249 Chr.16:84435765 - 84556540 on Build GRCh38 Gain LOC105371374 ATP2C2 TLDC1
nsv1061004 Chr.16:84405376 - 84561748 on Build GRCh38 Loss LOC105371374 ATP2C2 TLDC1
esv3892928 Chr.16:84339110 - 84524557 on Build GRCh38 Loss LOC105371374 ATP2C2 TLDC1
nsv573425 Chr.16:84298994 - 84575953 on Build GRCh38 Loss WFDC1 LOC105371374 ATP2C2 TLDC1 COTL1
nsv1064308 Chr.16:84461124 - 84592674 on Build GRCh38 Loss LOC105371374 ATP2C2 TLDC1 COTL1
esv3639429 Chr.16:84472177 - 84518552 on Build GRCh38 Gain TLDC1
dgv3057n100 Chr.16:84378422 - 84500091 on Build GRCh38 Loss LOC105371374 ATP2C2 TLDC1
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain FOXC2 KCNG4 ZDHHC7 GINS2 LOC105376777 KLHL36 LINC00311 FOXF1 MIR6774 LOC101928557 DNAAF1 FOXL1 LOC105371374 C16orf74 FLJ30679 FOXC2-AS1 FAM92B LOC102724344 ADAD2 LINC01081 TLDC1 MTHFSD COTL1 TAF1C WFDC1 IRF8 ATP2C2 LINC01082 LOC101928474 LOC101928614 GSE1 COX4I1 USP10 EMC8 FENDRR LINC00917 MIR1910 KIAA0513 LOC400548 LOC440390 MIR5093 LOC146513 CRISPLD2
nsv573454 Chr.16:84468700 - 84512067 on Build GRCh38 Loss TLDC1
nsv833311 Chr.16:84489192 - 84663857 on Build GRCh38 Loss KLHL36 TLDC1 COTL1
nsv1059640 Chr.16:84338790 - 84543759 on Build GRCh38 Loss LOC105371374 ATP2C2 TLDC1
dgv5262n54 Chr.16:84381903 - 84583279 on Build GRCh38 Loss LOC105371374 ATP2C2 TLDC1 COTL1
nsv457600 Chr.16:84387654 - 84501190 on Build GRCh38 Loss LOC105371374 ATP2C2 TLDC1
esv3892929 Chr.16:84492337 - 84506132 on Build GRCh38 Loss TLDC1
nsv1058049 Chr.16:84481312 - 84543759 on Build GRCh38 Loss TLDC1
dgv549e214 Chr.16:84434443 - 84555604 on Build GRCh38 Gain LOC105371374 ATP2C2 TLDC1

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More Information


Additional Information:

For this assay, SNP(s) [rs79686403] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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