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See other SPG7 CNV Assays ›
Gene Symbol
SPG7
Assay Reference Genome
Location

Chr.16:89527586 on build GRCh38
Cytoband
16q24.3
Assay ID Hs03950352_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
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Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 6687

Gene Name:

 SPG7, paraplegin matrix AAA peptidase subunit

Gene Aliases:

 CAR, CMAR, PGN, SPG5C

Location:

 Chr.16:89508379-89557768 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPG7 NM_003119.3 NP_003110.1
NM_199367.2 NP_955399.1
XM_005256321.4 XP_005256378.1
XM_006721264.3 XP_006721327.1
XM_017023597.1 XP_016879086.1
XM_017023598.1 XP_016879087.1
XM_017023599.1 XP_016879088.1
BC035929.2 AAH35929.1
BC036104.1 AAH36104.1
Y16610.1 CAA76314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3639586 Chr.16:89514722 - 89527655 on Build GRCh38 Gain SPG7
esv3639584 Chr.16:89504768 - 89531669 on Build GRCh38 Loss SPG7
esv2758670 Chr.16:89376499 - 89585740 on Build GRCh38 Gain ANKRD11 CPNE7 SPG7 SNORD68 LOC101927817 RPL13
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss ANKRD11 SPG7 ZNF276 LOC101927817 SPATA2L PRDM7 GAS8 FAM157C LOC105371419 LOC105371414 CPNE7 MC1R DPEP1 LOC107984817 CDK10 SPIRE2 AFG3L1P RPL13 CHMP1A CENPBD1 TCF25 LOC100287036 SNORD68 FANCA DBNDD1 GAS8-AS1 TUBB8P7 URAHP VPS9D1-AS1 DEF8 ZNF778 VPS9D1 SPATA33 TUBB3
nsv471118 Chr.16:89446826 - 89600929 on Build GRCh38 Gain ANKRD11 CPNE7 SPG7 SNORD68 LOC101927817 RPL13
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain ANKRD11 CPNE7 CHMP1A DPEP1 SPG7 SNORD68 LOC101927817 SPATA33 RPL13
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC339059 LOC400558 CDH15 SPG7 SPATA2L RNF166 PRDM7 GAS8 LOC105371419 LOC105371414 CPNE7 MC1R TRAPPC2L LOC107984817 SPIRE2 RPL13 PIEZO1 LOC105371409 CENPBD1 DBNDD1 LOC100289580 SLC22A31 URAHP GALNS VPS9D1-AS1 APRT LOC101927793 SNAI3-AS1 IL17C ANKRD11 ACSF3 ZNF276 LOC101927817 FAM157C MVD CTU2 DPEP1 CDK10 AFG3L1P LOC107987238 MIR4722 CHMP1A TCF25 LOC100287036 SNORD68 SNAI3 FANCA CDT1 GAS8-AS1 CYBA TUBB8P7 PABPN1L CBFA2T3 LINC00304 DEF8 ZNF778 VPS9D1 LOC100129697 SPATA33 TUBB3
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion CHMP1A SPG7 SNORD68 ZNF276 SPATA2L FANCA CPNE7 VPS9D1-AS1 DPEP1 VPS9D1 CDK10 SPATA33 RPL13

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