Hs03951575_cn

• Gene Symbol: CCDC154
• Assay Reference Genome Location: Chr.16:1435469 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 645811
• Gene Name: coiled-coil domain containing 154
• Gene Aliases: C16orf29
• Location: Chr.16:1434388-1444489 on Build GRCh38
• Assay Gene Location: Within Intron 14

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CCDC154	NM_001143980.1			NP_001137452.1
	JN935901.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv571161	Chr.16:1431019 - 1457987 on Build GRCh38	Gain	CCDC154 CLCN7 LOC105371045
esv2762143	Chr.16:1270592 - 1519404 on Build GRCh38	Gain	C16orf91 BAIAP3 TSR3 PTX4 CCDC154 CLCN7 UNKL IFT140 GNPTG UBE2I LOC105371045 TELO2
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	LOC100134368 C16orf59 WASIR2 FLJ42627 LMF1 RHOT2 CCNF WDR90 LINC00235 HBA2 PRR25 TELO2 MIR6859-4 SNORA64 CACNA1H EME2 HAGH LOC100287175 RPL3L RPL23AP5 C1QTNF8 RHBDF1 RPS2 PKD1 HBM MIR1225 PTX4 TRAF7 NHLRC4 MAPK8IP3 MIR3677 RAB40C NDUFB10 TBC1D24 LINC00254 LMF1-AS1 MIR3176 CCDC78 LOC105371184 SOX8 ARHGDIG PRSS27 MSLN RHBDL1 CASKIN1 BRICD5 DECR2 NPW GNG13 C16orf91 BAIAP3 SNORA78 TMEM204 RGS11 SPSB3 PIGQ NUBP2 MIR6767 MIR3180-5 KCTD5 FAM173A NME3 DDX11L10 RNPS1 LOC652276 ATP6V0C MIR5587 RAB26 GFER CEMP1 PRR35 MRPL28 MIR6768 ABCA17P WDR24 AMDHD2 UNKL RNF151 MSRB1 ABCA3 FAHD1 MRPS34 ZNF598 MEIOB NPRL3 NTHL1 SNHG19 HBZ LOC729652 LOC105371046 MLST8 HBA1 MIR3177 GNPTG LOC105371045 LOC105371038 HS3ST6 MIR662 FAM234A CCDC154 HN1L RAB11FIP3 NARFL PDIA2 MIR4717 TSC2 DNASE1L2 ERVK13-1 LOC105371047 IGFALS MIR4516 WFIKKN1 TPSB2 TPSAB1 SLC9A3R2 LOC106660606 PRSS29P SNRNP25 NOXO1 STUB1 MIR940 PGP SNORA10 NTN3 IFT140 POLR3K AXIN1 SSTR5-AS1 METTL26 TMEM8A LOC101929280 TPSG1 TBL3 MIR6511B1 FBXL16 LOC107987233 MIR3178 SNORD60 SSTR5 HAGHL UBE2I RPUSD1 JMJD8 CAPN15 SNHG9 E4F1 TPSD1 LOC107984876 TSR3 MCRIP2 LUC7L CLCN7 NME4 LOC105371049 CRAMP1 CHTF18 SYNGR3 PDPK1 MPG HBQ1 METRN ECI1
nsv471066	Chr.16:893361 - 1482836 on Build GRCh38	Loss	SSTR5-AS1 LMF1 SOX8 TPSD1 LOC107984876 TSR3 CLCN7 TPSG1 GNPTG TPSB2 TPSAB1 LOC105371045 PRSS29P C16orf91 CACNA1H BAIAP3 CCDC154 C1QTNF8 SSTR5 UNKL UBE2I LMF1-AS1
nsv952899	Chr.16:1142501 - 1535899 on Build GRCh38	Deletion	TPSD1 LOC105371047 TSR3 PTX4 CLCN7 TPSG1 GNPTG TPSB2 TPSAB1 LOC105371045 TELO2 PRSS29P C16orf91 CACNA1H BAIAP3 CCDC154 TMEM204 UNKL IFT140 UBE2I
nsv817713	Chr.16:1426464 - 1460566 on Build GRCh38	Loss	CCDC154 CLCN7 LOC105371045
nsv819844	Chr.16:1401518 - 1457987 on Build GRCh38	Gain	C16orf91 CCDC154 CLCN7 UNKL LOC105371045

More Information

Additional Information:

For this assay, SNP(s) [rs113641578] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation