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Gene Symbol
OGFOD3
Assay Reference Genome
Location

Chr.17:82403240 on build GRCh38
Cytoband
17q25.3
Assay ID Hs03960209_cn
Size
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 79701

Gene Name:

 2-oxoglutarate and iron dependent oxygenase domain containing 3

Gene Aliases:

 C17orf101

Location:

 Chr.17:82389210-82418637 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OGFOD3 NM_024648.2 NP_078924.1
NM_175902.4 NP_787098.3
NR_033265.1
AK025875.1 BAB15267.1
AK311057.1
BC008897.1 AAH08897.1
BC023602.2 AAH23602.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1059334 Chr.17:82277007 - 82411683 on Build GRCh38 Gain UTS2R SECTM1 TEX19 CD7 LOC101929511 LOC105376790 OGFOD3
nsv833573 Chr.17:82275053 - 82406183 on Build GRCh38 Loss UTS2R SECTM1 TEX19 CD7 LOC101929511 LOC105376790 OGFOD3
esv2760445 Chr.17:82267669 - 82421456 on Build GRCh38 Gain UTS2R SECTM1 HEXDC TEX19 CD7 LOC101929511 CSNK1D LOC105376790 OGFOD3
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain C17orf89 MAFG NARF MRPL12 MIR6787 SECTM1 FN3KRP SLC16A3 BAHCC1 SIRT7 CSNK1D LOC105376791 LOC101929552 WDR45B HGS GPS1 FOXK2 LOC101929511 LOC105371925 STRA13 CCDC137 CEP131 MIR4525 FN3K ANAPC11 HEXDC SLC25A10 SLC38A10 GCGR DCXR PCYT2 LRRC45 ALYREF FAAP100 P4HB C17orf62 RAC3 TEX19 OGFOD3 OXLD1 NPB PYCR1 TBCD UTS2R FASN ZNF750 CD7 ARL16 FSCN2 TSPAN10 MIR4740 ARHGDIA PPP1R27 NOTUM B3GNTL1 MIR3186 ASPSCR1 RAB40B SNORD134 RFNG LOC105371944 AATK MYADML2 AATK-AS1 ACTG1 LINC00482 DUS1L TMEM105 LOC100130370 MCRIP1 CCDC57 MIR6786 TEPSIN MAFG-AS1 PDE6G LOC105376790 NPLOC4
nsv1067160 Chr.17:82381853 - 82446450 on Build GRCh38 Loss C17orf62 HEXDC LOC105376790 OGFOD3
nsv828143 Chr.17:82400094 - 82429642 on Build GRCh38 Loss HEXDC OGFOD3
nsv469561 Chr.17:82251148 - 82472274 on Build GRCh38 Loss NARF UTS2R SECTM1 C17orf62 HEXDC TEX19 CD7 LOC101929511 CSNK1D LOC105376790 OGFOD3
nsv952394 Chr.17:82297625 - 82408424 on Build GRCh38 Deletion UTS2R SECTM1 TEX19 CD7 LOC105376790 OGFOD3
nsv1067194 Chr.17:82294731 - 82653129 on Build GRCh38 Gain WDR45B NARF UTS2R SECTM1 C17orf62 HEXDC TEX19 CD7 FOXK2 LOC105376790 OGFOD3
esv2762577 Chr.17:82244836 - 82838431 on Build GRCh38 Gain+Loss NARF TBCD UTS2R MIR4525 FN3K SECTM1 FN3KRP HEXDC ZNF750 CD7 CSNK1D LOC105376791 LOC101929552 WDR45B C17orf62 TEX19 FOXK2 LOC101929511 LOC105376790 RAB40B OGFOD3
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss MAFG NARF MIR6787 SECTM1 FN3KRP SLC16A3 SIRT7 CSNK1D LOC105376791 LOC101929552 WDR45B GPS1 FOXK2 LOC101929511 STRA13 MIR4525 FN3K ANAPC11 HEXDC DCXR PCYT2 LRRC45 ALYREF P4HB C17orf62 RAC3 TEX19 OGFOD3 NPB PYCR1 TBCD UTS2R FASN ZNF750 CD7 ARHGDIA PPP1R27 NOTUM B3GNTL1 METRNL ASPSCR1 RAB40B SNORD134 RFNG LOC105371944 MYADML2 DUS1L MCRIP1 CCDC57 MAFG-AS1 LOC105376790

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More Information


Additional Information:

For this assay, SNP(s) [rs117335740] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

protein modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)


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