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See other CHRNE CNV Assays ›
Gene Symbol
CHRNE
Assay Reference Genome
Location

Chr.17:4903615 on build GRCh38
Cytoband
17p13.2
Assay ID Hs03963831_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 1145

Gene Name:

 cholinergic receptor nicotinic epsilon subunit

Gene Aliases:

 ACHRE, CMS1D, CMS1E, CMS2A, CMS4A, CMS4B, CMS4C, FCCMS, SCCMS

Location:

 Chr.17:4897769-4905019 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHRNE XM_017024115.1 XP_016879604.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833350 Chr.17:4884713 - 5060776 on Build GRCh38 Loss C17orf107 CHRNE SLC52A1 LOC101927979 GP1BA PFN1 SLC25A11 MINK1 LOC102724009 SPAG7 MIR6865 INCA1 KIF1C RNF167 ENO3 MIR6864 CAMTA2
esv3572365 Chr.17:4874864 - 4942141 on Build GRCh38 Gain MINK1 C17orf107 CHRNE RNF167 GP1BA SLC25A11
nsv833349 Chr.17:4853631 - 4991300 on Build GRCh38 Loss C17orf107 CHRNE LOC101927979 GP1BA PFN1 SLC25A11 MINK1 SPAG7 MIR6865 INCA1 RNF167 ENO3 MIR6864 CAMTA2
nsv574275 Chr.17:4875192 - 4946479 on Build GRCh38 Gain MINK1 C17orf107 CHRNE RNF167 GP1BA PFN1 SLC25A11
nsv833347 Chr.17:4785297 - 4955981 on Build GRCh38 Loss C17orf107 VMO1 CHRNE GLTPD2 GP1BA PFN1 PSMB6 LOC107984973 SLC25A11 PLD2 MINK1 RNF167 ENO3
dgv3088n100 Chr.17:4868317 - 4942562 on Build GRCh38 Gain MINK1 C17orf107 CHRNE RNF167 GP1BA SLC25A11
nsv509647 Chr.17:4865132 - 4918672 on Build GRCh38 Insertion MINK1 C17orf107 CHRNE
nsv574273 Chr.17:4585589 - 5460332 on Build GRCh38 Gain C17orf107 CHRNE CXCL16 RABEP1 SMTNL2 SLC52A1 ZNF232 GLTPD2 GP1BA PSMB6 LOC107984973 SLC25A11 TM4SF5 MINK1 USP6 LOC102724009 MIR6865 RPAIN INCA1 RNF167 ENO3 ZNF594 SCIMP MIR6864 ALOX15 VMO1 C1QBP LOC101927979 PFN1 ZFP3 PELP1 DHX33 PLD2 LOC400568 SPAG7 LOC101928000 KIF1C ZMYND15 ARRB2 LOC101559451 MED11 NUP88 LOC100130950 CAMTA2

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