Hs03969318_cn

• Gene Symbol: MGC57346
• Assay Reference Genome Location: Chr.17:45632119 on build GRCh38
• Cytoband: 17q21.31

Target Gene Details

• Entrez Gene ID: 401884
• Gene Name: ADP-ribosylation factor pseudogene
• Gene Aliases: -
• Location: Chr.17:45620329-45637963 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MGC57346	NR_026680.3
	NR_027295.2
	AK311451.1

Target Gene Details

• Entrez Gene ID: 104909134
• Gene Name: MGC57346-CRHR1 readthrough
• Gene Aliases: -
• Location: Chr.17:45620329-45835828 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MGC57346-CRHR1	NM_001256299.2			NP_001243228.1
	NM_001303016.1			NP_001289945.1
	AK295559.1
	AK297590.1
	FJ543100.1
	HY123248.1
	HY316497.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2762433	Chr.17:45496768 - 46710828 on Build GRCh38	Gain+Loss	LOC107987253 KANSL1 CRHR1 ARL17B LOC644172 MGC57346 MAPT SPPL2C MAPT-IT1 LOC105376839 CRHR1-IT1 LRRC37A LRRC37A2 KANSL1-AS1 NSF MGC57346-CRHR1 MAPT-AS1 STH LRRC37A4P ARL17A LOC107987254 NSFP1
dgv3176n100	Chr.17:45496756 - 45633658 on Build GRCh38	Gain	MGC57346 LOC105376839 MGC57346-CRHR1 LRRC37A4P LOC644172
esv2758691	Chr.17:45380520 - 45738657 on Build GRCh38	Gain+Loss	MGC57346 ARHGAP27 LOC105376839 CRHR1-IT1 MGC57346-CRHR1 PLEKHM1 LRRC37A4P MIR4315-1 LOC644172
nsv1060303	Chr.17:45597851 - 45670724 on Build GRCh38	Gain	MGC57346 LOC105376839 CRHR1-IT1 MGC57346-CRHR1 LOC644172
esv26189	Chr.17:45496108 - 45634334 on Build GRCh38	Gain+Loss	MGC57346 LOC105376839 MGC57346-CRHR1 LRRC37A4P LOC644172
nsv833458	Chr.17:45567820 - 45707795 on Build GRCh38	Gain	MGC57346 LOC105376839 CRHR1-IT1 MGC57346-CRHR1 LOC644172

More Information

Additional Information:

For this assay, SNP(s) [rs73307582] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transmembrane signal receptor