Hs03973396_cn

• Gene Symbol: CALCOCO2
• Assay Reference Genome Location: Chr.17:48845246 on build GRCh38
• Cytoband: 17q21.32

Target Gene Details

• Entrez Gene ID: 10241
• Gene Name: calcium binding and coiled-coil domain 2
• Gene Aliases: NDP52
• Location: Chr.17:48830988-48865245 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CALCOCO2	NM_001261390.1			NP_001248319.1
	NM_001261391.1			NP_001248320.1
	NM_001261393.1			NP_001248322.1
	NM_001261395.1			NP_001248324.1
	NM_005831.4			NP_005822.1
	AK222666.1			BAD96386.1
	AK223227.1			BAD96947.1
	AK293137.1
	AK293329.1
	AK298177.1
	AK303313.1
	AK304024.1
	AK314796.1
	AL042638.1
	AL046722.1
	BC004130.2			AAH04130.1
	BC015893.2			AAH15893.1
	BG773301.1
	CR456763.1			CAG33044.1
	U22897.1			AAA75297.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv482969	Chr.17:48843507 - 48994527 on Build GRCh38	Loss	ATP5G1 SNF8 GIP UBE2Z LOC105371814 CALCOCO2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

viral process
response to interferon-gamma
xenophagy
positive regulation of autophagosome maturation

Function(s)

protein binding
protein homodimerization activity