Hs03987055_cn

• Gene Symbol: SPNS3
• Assay Reference Genome Location: Chr.17:4435639 on build GRCh38
• Cytoband: 17p13.2

Target Gene Details

• Entrez Gene ID: 201305
• Gene Name: sphingolipid transporter 3 (putative)
• Gene Aliases: -
• Location: Chr.17:4433924-4488204 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPNS3	NM_001320449.1			NP_001307378.1
	NM_182538.4			NP_872344.3
	XM_011523723.1			XP_011522025.1
	XM_011523724.1			XP_011522026.1
	XM_011523725.1			XP_011522027.1
	AK172832.1			BAD18797.1
	BC023646.2			AAH23646.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833345	Chr.17:4328495 - 4508526 on Build GRCh38	Loss	UBE2G1 SPNS2 SPNS3
nsv574268	Chr.17:4407344 - 4491875 on Build GRCh38	Gain	SPNS3
dgv3087n100	Chr.17:4391668 - 4459140 on Build GRCh38	Loss	SPNS3
esv3639773	Chr.17:4304329 - 4486263 on Build GRCh38	Gain	UBE2G1 SPNS3
dgv5430n54	Chr.17:4416311 - 4479434 on Build GRCh38	Gain	SPNS3
esv3892955	Chr.17:4310710 - 4476283 on Build GRCh38	Gain	UBE2G1 SPNS3
nsv1058176	Chr.17:4189086 - 4502476 on Build GRCh38	Gain	UBE2G1 ANKFY1 SPNS2 SPNS3
nsv1065759	Chr.17:4405261 - 4476552 on Build GRCh38	Gain	SPNS3
nsv574269	Chr.17:4412211 - 4554285 on Build GRCh38	Gain	SPNS2 SPNS3 MYBBP1A
nsv574267	Chr.17:4395961 - 4451053 on Build GRCh38	Loss	SPNS3
esv3639779	Chr.17:4412812 - 4481920 on Build GRCh38	Gain	SPNS3
esv2762544	Chr.17:4178680 - 4476552 on Build GRCh38	Gain	UBE2G1 ANKFY1 SPNS3

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

sphingosine-1-phosphate signaling pathway
lipid transport
locomotion
transmembrane transport

Function(s)

sphingolipid transporter activity