Hs04008519_cn

• Gene Symbol: RCN3
• Assay Reference Genome Location: Chr.19:49533962 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 57333
• Gene Name: reticulocalbin 3
• Gene Aliases: RLP49
• Location: Chr.19:49527579-49543638 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RCN3	NM_020650.2			NP_065701.2
	XM_005259089.3			XP_005259146.1
	XM_011527143.1			XP_011525445.1
	XM_017027023.1			XP_016882512.1
	AF183423.1			AAG09692.1
	AY195859.1			AAO43054.1
	AY358423.1			AAQ88789.1
	BC013436.1			AAH13436.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SLC17A7 NTF4 PLA2G4C-AS1 TRPM4 SNAR-B1 SNAR-A4 SNAR-G1 SNORD34 KCNA7 GRWD1 ATF5 CA11 SNAR-A9 CPT1C PTOV1-AS1 CCDC155 PRR12 SNAR-A11 NTN5 DBP FAM83E CCDC114 RPL13A SNAR-A8 CD37 MIR4749 BCL2L12 SNORD35A LHB SIGLEC16 PIH1D1 FUT1 FTL NUP62 SNAR-A1 SNORD35B ALDH16A1 C19orf68 SNAR-B2 PRRG2 SPHK2 MED25 SNAR-A13 SIGLEC11 SNAR-D RCN3 TBC1D17 RUVBL2 RRAS RPL18 SCAF1 TMEM143 CARD8 GFY FGF21 LOC101928295 IL4I1 PPFIA3 BAX DHDH FUZ MIR6798 EMP3 CGB3 LIG1 SNAR-C1 LMTK3 HRC SNAR-C2 SEC1P PTOV1-AS2 TEAD2 ELSPBP1 MIR6799 IZUMO1 FCGRT PTOV1 PRMT1 SNAR-A5 PPP1R15A DKKL1 CGB2 ZNF114 LIN7B GRIN2D VRK3 TULP2 CARD8-AS1 CYTH2 LOC105447645 FUT2 CABP5 SNAR-C4 PLEKHA4 SNRNP70 NUCB1 C19orf73 NOSIP NUCB1-AS1 LOC101059948 MIR4751 TSKS SYNGR4 MIR6800 CGB7 PTH2 SULT2B1 SNAR-A12 IRF3 LOC105372430 SNAR-G2 SNAR-A7 SPACA4 SNAR-A10 GYS1 ZNF473 FLJ26850 MIR4750 AKT1S1 RPS11 FLT3LG MAMSTR SNAR-C5 CGB5 CGB1 PNKP PLA2G4C CGB8 AP2A1 HSD17B14 SNORD33 ADM5 SLC6A16 SNAR-A6 MIR150 SNORD32A MIR4324 LOC100287477 BSPH1 BCAT2 SNAR-A14 MIR5088 SNAR-A3 SNAR-C3 RASIP1 SNAR-A2 KDELR1 KCNJ14
nsv833863	Chr.19:49479177 - 49629716 on Build GRCh38	Loss	SNORD35B SNORD33 FCGRT MIR150 SNORD32A RPL13A SNORD34 PRRG2 RPS11 NOSIP SNORD35A FLT3LG RCN3 PRR12
nsv833862	Chr.19:49448789 - 49570676 on Build GRCh38	Loss	SNORD35B SNORD33 FCGRT ALDH16A1 MIR150 SNORD32A RPL13A SNORD34 RPS11 NOSIP SNORD35A FLT3LG RCN3 PIH1D1
nsv1160655	Chr.19:49489110 - 49841830 on Build GRCh38	Deletion	MIR6799 SNORD35B FCGRT SNORD34 PRRG2 PRMT1 RPS11 MED25 RCN3 CPT1C PTOV1-AS1 PRR12 RRAS SCAF1 AP2A1 SNORD33 ADM5 MIR150 SNORD32A RPL13A FUZ BCL2L12 NOSIP SNORD35A TSKS MIR6800 MIR5088 IRF3

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Function(s)

calcium ion binding
protein binding