Hs04009801_cn

• Gene Symbol: RCN3
• Assay Reference Genome Location: Chr.19:49531722 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 57333
• Gene Name: reticulocalbin 3
• Gene Aliases: RLP49
• Location: Chr.19:49527579-49543638 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RCN3	NM_020650.2			NP_065701.2
	XM_005259089.3			XP_005259146.1
	XM_011527143.1			XP_011525445.1
	XM_017027023.1			XP_016882512.1
	AF183423.1			AAG09692.1
	AY195859.1			AAO43054.1
	AY358423.1			AAQ88789.1
	BC013436.1			AAH13436.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	TEAD2 NUCB1 FUT2 CARD8-AS1 SIGLEC11 MED25 DKKL1 FGF21 FLT3LG PLEKHA4 LOC100287477 PPP1R15A SNORD35B SNRNP70 SNORD34 SCAF1 TSKS SNAR-C1 SNAR-A4 MIR150 SNORD33 SNAR-A8 PTH2 ALDH16A1 LIN7B HRC FUT1 EMP3 KCNA7 RPL18 SNAR-A6 KDELR1 BCL2L12 CGB3 LOC105372430 SNAR-A3 KCNJ14 SNAR-A7 MIR4751 PIH1D1 TBC1D17 PNKP FCGRT SPACA4 SNAR-A12 CPT1C SULT2B1 RPS11 CCDC114 LOC101059948 SNORD35A ADM5 CABP5 LOC101928295 MIR6800 MIR6799 CGB2 NTN5 BSPH1 CGB8 RRAS IL4I1 SNAR-A13 ATF5 LMTK3 SPHK2 C19orf73 FTL ELSPBP1 PTOV1-AS2 CA11 BCAT2 PTOV1-AS1 SNAR-A14 RASIP1 C19orf68 LIG1 GYS1 IRF3 SNAR-A10 LHB NOSIP VRK3 SNAR-A11 MAMSTR RCN3 CYTH2 SNAR-D MIR6798 NUP62 MIR5088 SLC6A16 FLJ26850 CGB5 PRR12 DHDH IZUMO1 LOC105447645 SNAR-A9 FAM83E SNAR-C4 CD37 CCDC155 PRRG2 SNAR-A1 SNAR-G1 SNAR-C2 SIGLEC16 SNAR-C3 BAX CGB1 GRIN2D SNAR-B1 CARD8 NUCB1-AS1 HSD17B14 GFY SNAR-A2 TMEM143 DBP CGB7 GRWD1 NTF4 MIR4749 PPFIA3 PLA2G4C-AS1 AP2A1 MIR4324 SEC1P SNORD32A SLC17A7 RPL13A FUZ ZNF473 SNAR-A5 PLA2G4C MIR4750 SNAR-G2 TRPM4 PTOV1 PRMT1 SYNGR4 SNAR-C5 RUVBL2 SNAR-B2 AKT1S1 TULP2 ZNF114
nsv833863	Chr.19:49479177 - 49629716 on Build GRCh38	Loss	FCGRT MIR150 SNORD33 RPS11 PRR12 FLT3LG NOSIP SNORD35A SNORD35B PRRG2 SNORD34 SNORD32A RCN3 RPL13A
nsv833862	Chr.19:49448789 - 49570676 on Build GRCh38	Loss	FCGRT MIR150 SNORD33 RPS11 ALDH16A1 FLT3LG NOSIP SNORD35A SNORD35B SNORD34 SNORD32A RCN3 RPL13A PIH1D1
nsv1160655	Chr.19:49489110 - 49841830 on Build GRCh38	Deletion	FCGRT PTOV1-AS1 CPT1C RPS11 MED25 IRF3 NOSIP SNORD35A SNORD35B AP2A1 ADM5 SNORD34 SCAF1 SNORD32A TSKS MIR6800 MIR6799 RCN3 RPL13A FUZ MIR5088 MIR150 SNORD33 RRAS PRR12 PRMT1 PRRG2 BCL2L12

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

calmodulin-related

Gene Ontology Categories:

Function(s)

calcium ion binding
protein binding