Genomic Map
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Target Gene Details
Entrez Gene ID: | 682 |
Gene Name: | basigin (Ok blood group) |
Gene Aliases: |
5F7, CD147, EMMPRIN, OK, TCSF |
Location: |
Chr.19:571277-583493 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| BSG | NM_001322243.1 | NP_001309172.1 | ||
| NM_001728.3 | NP_001719.2 | |||
| NM_198589.2 | NP_940991.1 | |||
| NM_198590.2 | NP_940992.1 | |||
| NM_198591.2 | NP_940993.1 | |||
| XM_017027173.1 | XP_016882662.1 | |||
| AB072923.1 | BAB88938.1 | |||
| AB085790.1 | BAC76828.1 | |||
| AB091680.1 | BAC67168.1 | |||
| AF548371.1 | AAN40694.1 | |||
| AK296858.1 | ||||
| AK297880.1 | ||||
| AK302231.1 | ||||
| AY358113.1 | AAQ88480.1 | |||
| BC009040.2 | AAH09040.1 | |||
| BG480530.1 | ||||
| BI464857.1 | ||||
| CB153773.1 | ||||
| D45131.1 | BAA08109.1 | |||
| DA007913.1 | ||||
| GU557064.1 | ||||
| GU557065.1 | ||||
| L10240.1 | AAA68936.1 | |||
| L20471.1 | AAB41120.1 | |||
| M87879.1 | AAA91084.1 | |||
| X64364.1 | CAA45716.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv428360 | Chr.19:232069 - 702131 on Build GRCh38 | Gain |
 FSTL3
BSG
POLRMT
HCN2
PRSS57
ODF3L2
GZMM
SHC2
RNF126
C2CD4C
MIER2
MADCAM1
FGF22
CDC34
LOC101929060
TPGS1
THEG
PLPP2
|
| esv3643355 | Chr.19:572192 - 582084 on Build GRCh38 | Gain |
BSG
|
| nsv577978 | Chr.19:294526 - 782854 on Build GRCh38 | Gain |
FSTL3
BSG
POLRMT
PALM
LOC101928450
HCN2
PRSS57
ODF3L2
GZMM
SHC2
MISP
RNF126
C2CD4C
MIER2
MADCAM1
FGF22
CDC34
LOC101929060
TPGS1
THEG
|
| nsv953938 | Chr.19:355801 - 1104501 on Build GRCh38 | Deletion |
FSTL3
ELANE
CNN2
LOC105372235
ARHGAP45
PALM
LOC101928450
R3HDM4
HCN2
MIR4745
PRSS57
WDR18
MED16
ARID3A
MIR3187
RNF126
C2CD4C
GPX4
RNU6-9
GRIN3B
CFD
TMEM259
FGF22
TPGS1
ABCA7
BSG
POLRMT
PTBP1
ODF3L2
GZMM
SHC2
MISP
PLPPR3
AZU1
KISS1R
RNU6-2
PRTN3
MADCAM1
POLR2E
CDC34
THEG
|
| nsv470101 | Chr.19:401714 - 1008505 on Build GRCh38 | Loss |
FSTL3
ELANE
LOC105372235
PALM
LOC101928450
R3HDM4
HCN2
MIR4745
PRSS57
WDR18
MED16
ARID3A
MIR3187
RNF126
C2CD4C
RNU6-9
GRIN3B
CFD
FGF22
TPGS1
BSG
POLRMT
PTBP1
ODF3L2
GZMM
SHC2
MISP
PLPPR3
AZU1
KISS1R
PRTN3
MADCAM1
CDC34
|
| nsv578152 | Chr.19:572860 - 583812 on Build GRCh38 | Gain |
BSG
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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