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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49706371 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04014627_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 15 - Intron 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AB208884.1 BAD92121.1
AF357970.1 AAL99615.1
AK074389.1 BAB85068.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
AL831876.1 CAD38561.2
BC029104.1 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss BCL2L12 SCAF1 MIR5088 ADM5 CPT1C NOSIP IRF3 PRR12 PRRG2 PRMT1 RRAS
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss BCL2L12 SCAF1 MIR5088 ADM5 CPT1C NOSIP IRF3 PRR12 PRRG2 PRMT1 RRAS
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss MIR4750 SNAR-A12 SEC1P RPS11 C19orf68 TRPM4 PRMT1 LOC105447645 MIR4751 MIR4324 CCDC155 RCN3 SYNGR4 GRWD1 MAMSTR RUVBL2 BSPH1 FTL LOC101928295 SNAR-G1 KCNJ14 EMP3 CGB8 SNORD35B RASIP1 PTOV1 DBP PTOV1-AS1 LOC101059948 LOC105372430 SNAR-A5 FGF21 DHDH BCL2L12 NOSIP LHB MED25 PTOV1-AS2 SNAR-A14 LMTK3 PTH2 SPHK2 FAM83E HRC PRR12 SLC17A7 PRRG2 ELSPBP1 C19orf73 SIGLEC16 AP2A1 RPL18 HSD17B14 ADM5 ALDH16A1 BCAT2 SIGLEC11 SNAR-A9 SNAR-C1 ZNF114 CABP5 ATF5 GYS1 SNORD35A SNAR-C3 NTN5 MIR150 TMEM143 SNAR-C4 CYTH2 SULT2B1 CGB1 SNORD32A LIG1 MIR6798 LOC100287477 SPACA4 AKT1S1 SNAR-A7 SNORD34 SNAR-A13 GRIN2D FUZ MIR5088 TEAD2 CD37 SNAR-A10 FLJ26850 PLEKHA4 SNAR-B1 FCGRT SNAR-A2 DKKL1 IL4I1 PNKP SLC6A16 PPFIA3 ZNF473 SNRNP70 MIR4749 CARD8 VRK3 SNAR-B2 IRF3 BAX RRAS FLT3LG SNORD33 KCNA7 CCDC114 CARD8-AS1 TULP2 TSKS MIR6800 NUCB1 SNAR-A4 FUT1 IZUMO1 SNAR-D TBC1D17 LIN7B CGB7 PIH1D1 SNAR-A8 SNAR-A1 PPP1R15A RPL13A SNAR-A11 MIR6799 PLA2G4C-AS1 SNAR-C2 SNAR-A6 NUCB1-AS1 CA11 CGB2 CGB5 FUT2 GFY KDELR1 SNAR-C5 SNAR-A3 SCAF1 CPT1C PLA2G4C CGB3 SNAR-G2 NUP62 NTF4
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain BCL2L12 SCAF1 MIR5088 ADM5 CPT1C IRF3 PRR12 PRMT1 RRAS
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR4750 FUZ MIR5088 PRR12 TBC1D17 PRRG2 PRMT1 AP2A1 MIR4751 IL4I1 PNKP ADM5 MIR4749 MIR6799 ATF5 PTOV1 IRF3 PTOV1-AS1 RRAS BCL2L12 SCAF1 AKT1S1 CPT1C NOSIP TSKS MED25 MIR6800 PTOV1-AS2 NUP62
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain BCL2L12 SCAF1 MIR5088 ADM5 CPT1C NOSIP IRF3 PRR12 PRRG2 PRMT1 RRAS
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion FUZ MIR5088 RPS11 PRR12 PRRG2 PRMT1 FCGRT AP2A1 ADM5 RCN3 RPL13A MIR6799 SNORD35A MIR150 SNORD35B IRF3 PTOV1-AS1 SNORD32A RRAS BCL2L12 SCAF1 SNORD33 CPT1C NOSIP SNORD34 TSKS MED25 MIR6800

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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