Hs04015550_cn

• Gene Symbol: EFNA2
• Assay Reference Genome Location: Chr.19:1287215 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 1943
• Gene Name: ephrin A2
• Gene Aliases: ELF-1, EPLG6, HEK7-L, LERK-6, LERK6
• Location: Chr.19:1282817-1301431 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EFNA2	NM_001405.3			NP_001396.2
	XM_017026449.1			XP_016881938.1
	XM_017026450.1			XP_016881939.1
	AJ007292.1			CAA07435.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1055164	Chr.19:1246647 - 1389804 on Build GRCh38	Gain	MIDN CIRBP EFNA2 CIRBP-AS1 NDUFS7 C19orf24 MUM1
dgv136n111	Chr.19:1038223 - 1329640 on Build GRCh38	Deletion	CNN2 MIDN STK11 ATP5D CIRBP-AS1 ARHGAP45 POLR2E C19orf24 SBNO2 CBARP CIRBP EFNA2 ABCA7 GPX4 LOC102725180
nsv9662	Chr.19:893394 - 1317740 on Build GRCh38	Gain	RNU6-9 ARID3A CNN2 MIDN STK11 GRIN3B ATP5D CIRBP-AS1 ARHGAP45 R3HDM4 POLR2E C19orf24 SBNO2 CBARP CIRBP EFNA2 ABCA7 GPX4 RNU6-2 LOC102725180 TMEM259 WDR18 LOC105372235 KISS1R
nsv470104	Chr.19:1170446 - 1325151 on Build GRCh38	Loss	CBARP MIDN CIRBP STK11 EFNA2 ATP5D LOC102725180 CIRBP-AS1 C19orf24 SBNO2
nsv1160555	Chr.19:887275 - 1346084 on Build GRCh38	Deletion	RNU6-9 ARID3A CNN2 MIDN STK11 ATP5D CIRBP-AS1 ARHGAP45 R3HDM4 C19orf24 EFNA2 GPX4 RNU6-2 LOC102725180 LOC105372235 GRIN3B MED16 POLR2E SBNO2 CBARP CIRBP ABCA7 TMEM259 WDR18 KISS1R
nsv953941	Chr.19:1205602 - 1322401 on Build GRCh38	Deletion	CBARP MIDN CIRBP STK11 EFNA2 ATP5D CIRBP-AS1 C19orf24
esv3643391	Chr.19:1273202 - 1294781 on Build GRCh38	Gain	CIRBP EFNA2 C19orf24
nsv1060536	Chr.19:1228266 - 1329640 on Build GRCh38	Gain	CBARP MIDN CIRBP STK11 EFNA2 ATP5D CIRBP-AS1 C19orf24
esv3643389	Chr.19:1264454 - 1397379 on Build GRCh38	Gain	CIRBP EFNA2 CIRBP-AS1 NDUFS7 GAMT C19orf24 MUM1
nsv470103	Chr.19:1086044 - 1325151 on Build GRCh38	Gain	MIDN STK11 ATP5D CIRBP-AS1 ARHGAP45 POLR2E C19orf24 SBNO2 CBARP CIRBP EFNA2 GPX4 LOC102725180
esv2758743	Chr.19:951641 - 1544934 on Build GRCh38	Gain+Loss	ARID3A CNN2 MIDN STK11 ATP5D PCSK4 CIRBP-AS1 ARHGAP45 C19orf24 MUM1 RPS15 EFNA2 C19orf25 GPX4 RNU6-2 LOC102725180 APC2 DAZAP1 LOC105372235 GRIN3B ADAMTSL5 POLR2E GAMT SBNO2 REEP6 CBARP CIRBP ABCA7 PLK5 NDUFS7 TMEM259 WDR18

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane-bound signaling molecule

Gene Ontology Categories:

Process(es)

cell-cell signaling
axon guidance
olfactory bulb development
osteoclast differentiation
bone remodeling
ephrin receptor signaling pathway

Function(s)

ephrin receptor binding