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See other TPGS1 CNV Assays ›
Gene Symbol
TPGS1
Assay Reference Genome
Location

Chr.19:512540 on build GRCh38
Cytoband
19p13.3
Assay ID Hs04016954_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 91978

Gene Name:

 tubulin polyglutamylase complex subunit 1

Gene Aliases:

 C19orf20, GTRGEO22, PGs1

Location:

 Chr.19:507497-519654 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TPGS1 NM_033513.2 NP_277048.2
AK126170.1 BAC86469.1
BC009520.1 AAH09520.1
BM846833.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516566 Chr.19:495722 - 525739 on Build GRCh38 Gain TPGS1 MADCAM1
esv3574264 Chr.19:490245 - 516350 on Build GRCh38 Gain TPGS1 MADCAM1 ODF3L2
nsv509712 Chr.19:391096 - 558643 on Build GRCh38 Insertion TPGS1 SHC2 MADCAM1 C2CD4C ODF3L2 CDC34 GZMM
dgv6155n54 Chr.19:404077 - 519032 on Build GRCh38 Loss TPGS1 SHC2 MADCAM1 C2CD4C ODF3L2
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain FGF22 PLPP2 LOC101929060 TPGS1 RNF126 SHC2 MADCAM1 C2CD4C ODF3L2 THEG MIER2 PRSS57 FSTL3 BSG HCN2 CDC34 GZMM POLRMT
dgv6166n54 Chr.19:507731 - 520131 on Build GRCh38 Gain TPGS1
dgv1013e212 Chr.19:416231 - 521269 on Build GRCh38 Gain TPGS1 SHC2 MADCAM1 ODF3L2
esv33417 Chr.19:474104 - 518906 on Build GRCh38 Gain+Loss TPGS1 MADCAM1 ODF3L2
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain FGF22 LOC101929060 TPGS1 RNF126 SHC2 MADCAM1 C2CD4C ODF3L2 MISP THEG MIER2 PALM PRSS57 FSTL3 BSG HCN2 LOC101928450 CDC34 GZMM POLRMT
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion FGF22 RNU6-2 TPGS1 SHC2 ODF3L2 R3HDM4 THEG KISS1R GPX4 WDR18 PLPPR3 AZU1 BSG LOC105372235 POLR2E MIR3187 HCN2 CDC34 GZMM CFD ELANE RNU6-9 POLRMT ABCA7 RNF126 MADCAM1 C2CD4C PTBP1 ARHGAP45 MISP TMEM259 MED16 PALM MIR4745 PRSS57 FSTL3 PRTN3 GRIN3B ARID3A CNN2 LOC101928450
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss FGF22 TPGS1 SHC2 ODF3L2 R3HDM4 KISS1R WDR18 PLPPR3 AZU1 BSG LOC105372235 MIR3187 HCN2 CDC34 GZMM CFD ELANE RNU6-9 POLRMT RNF126 MADCAM1 C2CD4C PTBP1 MISP MED16 PALM MIR4745 PRSS57 FSTL3 PRTN3 GRIN3B ARID3A LOC101928450
esv28250 Chr.19:470703 - 521323 on Build GRCh38 Gain+Loss TPGS1 MADCAM1 ODF3L2

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