Hs04018108_cn

• Gene Symbol: ARID3A
• Assay Reference Genome Location: Chr.19:925922 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 1820
• Gene Name: AT-rich interaction domain 3A
• Gene Aliases: BRIGHT, DRIL1, DRIL3, E2FBP1
• Location: Chr.19:925733-975934 on Build GRCh38
• Assay Gene Location: Overlaps Exon 1 - Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ARID3A	XM_017026445.1			XP_016881934.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv9662	Chr.19:893394 - 1317740 on Build GRCh38	Gain	CIRBP-AS1 RNU6-9 TMEM259 C19orf24 CNN2 STK11 EFNA2 LOC102725180 WDR18 SBNO2 LOC105372235 GRIN3B GPX4 KISS1R POLR2E ATP5D CBARP RNU6-2 R3HDM4 ARHGAP45 ABCA7 CIRBP MIDN ARID3A
nsv1160555	Chr.19:887275 - 1346084 on Build GRCh38	Deletion	CIRBP-AS1 RNU6-9 TMEM259 C19orf24 CNN2 STK11 EFNA2 LOC102725180 LOC105372235 GRIN3B GPX4 MED16 RNU6-2 R3HDM4 ARHGAP45 CIRBP MIDN WDR18 SBNO2 KISS1R POLR2E ATP5D CBARP ABCA7 ARID3A
dgv134n111	Chr.19:607984 - 967584 on Build GRCh38	Deletion	MIR4745 RNU6-9 POLRMT PTBP1 MISP CFD PALM PRSS57 KISS1R FSTL3 LOC101928450 MED16 R3HDM4 FGF22 PRTN3 ELANE RNF126 HCN2 PLPPR3 AZU1 MIR3187 ARID3A
nsv578188	Chr.19:923744 - 1059005 on Build GRCh38	Loss	TMEM259 CNN2 WDR18 RNU6-2 LOC105372235 ABCA7 GRIN3B ARID3A
esv2665746	Chr.19:911945 - 932692 on Build GRCh38	Deletion	R3HDM4 KISS1R ARID3A
esv2673891	Chr.19:925245 - 928392 on Build GRCh38	Deletion	ARID3A
nsv953938	Chr.19:355801 - 1104501 on Build GRCh38	Deletion	MIR4745 RNU6-9 TMEM259 CNN2 POLRMT BSG SHC2 LOC105372235 GRIN3B GPX4 C2CD4C TPGS1 GZMM MED16 RNU6-2 R3HDM4 FGF22 PRTN3 ARHGAP45 HCN2 PLPPR3 MADCAM1 CDC34 WDR18 PTBP1 MISP ODF3L2 CFD PALM PRSS57 THEG KISS1R FSTL3 POLR2E LOC101928450 ELANE ABCA7 RNF126 AZU1 MIR3187 ARID3A
nsv470101	Chr.19:401714 - 1008505 on Build GRCh38	Loss	MIR4745 RNU6-9 POLRMT BSG SHC2 LOC105372235 GRIN3B C2CD4C TPGS1 GZMM MED16 R3HDM4 FGF22 PRTN3 HCN2 PLPPR3 MADCAM1 CDC34 WDR18 PTBP1 MISP ODF3L2 CFD PALM PRSS57 KISS1R FSTL3 LOC101928450 ELANE RNF126 AZU1 MIR3187 ARID3A

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
positive regulation of transcription from RNA polymerase II promoter

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
chromatin binding
protein binding
protein homodimerization activity