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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49694764 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04019722_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AF357970.1 AAL99615.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1
BP194020.1
DB456457.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss PRRG2 SCAF1 NOSIP PRR12 BCL2L12 PRMT1 MIR5088 ADM5 RRAS CPT1C IRF3
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss PRRG2 SCAF1 NOSIP PRR12 BCL2L12 PRMT1 MIR5088 ADM5 RRAS CPT1C IRF3
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss PLA2G4C-AS1 TRPM4 LOC105447645 SNAR-A8 TULP2 MIR5088 CGB5 MIR4749 FUT2 CPT1C GRWD1 SIGLEC11 SLC17A7 TSKS SCAF1 KCNJ14 SPACA4 SYNGR4 RPL13A FLJ26850 MIR4751 NUCB1-AS1 NUP62 CYTH2 TEAD2 SPHK2 SNAR-A4 CCDC155 NUCB1 RASIP1 LIG1 HRC MIR6799 PPFIA3 CABP5 SNAR-A3 MIR150 AKT1S1 LMTK3 ELSPBP1 LHB PNKP GRIN2D SNORD32A SNAR-A2 LOC105372430 FCGRT VRK3 SNAR-A13 LOC101059948 BAX IRF3 DBP MIR4750 RPL18 FUT1 PTH2 SIGLEC16 CGB2 SNORD34 SNAR-C4 IZUMO1 CARD8-AS1 PIH1D1 SNAR-G2 PPP1R15A SNAR-D SNAR-B1 CA11 PLEKHA4 ADM5 RPS11 MED25 PRRG2 BCAT2 C19orf68 FUZ PTOV1-AS1 SNORD35B SLC6A16 CGB1 SNRNP70 KCNA7 LOC101928295 SNAR-B2 NOSIP LIN7B SULT2B1 PRMT1 FGF21 PTOV1 SNAR-A9 SNAR-C5 SNORD35A GFY CD37 SNAR-A6 RCN3 MIR6798 KDELR1 SNAR-A10 MAMSTR CGB3 ALDH16A1 CGB7 BCL2L12 LOC100287477 IL4I1 RRAS SNORD33 SNAR-A5 TMEM143 PTOV1-AS2 SNAR-A1 NTN5 FAM83E PLA2G4C ZNF114 CGB8 GYS1 MIR4324 BSPH1 DHDH ATF5 PRR12 FLT3LG SNAR-C3 SNAR-A12 SEC1P ZNF473 FTL SNAR-A11 EMP3 SNAR-G1 CARD8 AP2A1 MIR6800 CCDC114 SNAR-C1 SNAR-C2 DKKL1 NTF4 TBC1D17 HSD17B14 SNAR-A7 SNAR-A14 C19orf73 RUVBL2
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain SCAF1 PRR12 BCL2L12 PRMT1 MIR5088 ADM5 RRAS CPT1C IRF3
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion BCL2L12 AKT1S1 MIR5088 ADM5 MIR4749 IL4I1 RRAS CPT1C PTOV1-AS2 MED25 TSKS PRRG2 SCAF1 PNKP FUZ PTOV1-AS1 MIR4751 NOSIP ATF5 PRR12 NUP62 PRMT1 PTOV1 IRF3 MIR4750 AP2A1 MIR6800 TBC1D17 MIR6799
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain PRRG2 SCAF1 NOSIP PRR12 BCL2L12 PRMT1 MIR5088 ADM5 RRAS CPT1C IRF3
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion BCL2L12 MIR150 MIR5088 ADM5 RRAS SNORD33 CPT1C RPS11 MED25 TSKS PRRG2 SCAF1 FUZ SNORD32A PTOV1-AS1 SNORD35B RPL13A FCGRT NOSIP PRR12 PRMT1 SNORD35A IRF3 AP2A1 MIR6800 SNORD34 RCN3 MIR6799

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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