Hs04019751_cn

• Gene Symbol: LILRA1
• Assay Reference Genome Location: Chr.19:54598158 on build GRCh38
• Cytoband: 19q13.42

Target Gene Details

• Entrez Gene ID: 11024
• Gene Name: leukocyte immunoglobulin like receptor A1
• Gene Aliases: CD85I, LIR-6, LIR6
• Location: Chr.19:54593576-54602381 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LILRA1	NM_001278318.1			NP_001265247.1
	NM_001278319.1			NP_001265248.1
	NM_006863.3			NP_006854.1
	NR_103501.1
	NR_103502.1
	NR_103503.1
	AF025529.1			AAB87663.1
	AF025530.1			AAB87664.1
	AK290919.1
	BC093708.1			AAH93708.1
	BC101514.1			AAI01515.1
	EU915602.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv435n27	Chr.19:54519000 - 54645591 on Build GRCh38	Loss	MIR8061 KIR3DX1 LILRA2 LILRB1 LILRA1
esv2667609	Chr.19:54472514 - 55094226 on Build GRCh38	Deletion	LILRP2 CDC42EP5 KIR3DX1 NCR1 KIR2DS4 LILRB4 RDH13 KIR3DL2 LOC102724300 FCAR GP6 LILRB1 KIR2DL3 PPP1R12C LILRA2 NLRP2 KIR3DL3 EPS8L1 MIR8061 NLRP7 KIR3DL1 LAIR2 KIR2DL1 LOC101928804 LILRA1 KIR2DL4
esv3583532	Chr.19:54592138 - 54605384 on Build GRCh38	Loss	LILRA1
dgv16e196	Chr.19:54575263 - 54747293 on Build GRCh38	Duplication	LILRP2 MIR8061 LILRA2 LILRB1 KIR2DL3 LILRB4 KIR3DL3 LILRA1
nsv1065887	Chr.19:54518252 - 54641325 on Build GRCh38	Loss	KIR3DX1 LILRA2 LILRB1 LILRA1
nsv428372	Chr.19:54596370 - 54954956 on Build GRCh38	Gain+Loss	LILRP2 NCR1 KIR2DS4 LILRB4 KIR3DL3 KIR3DL2 LOC102724300 FCAR MIR8061 NLRP7 KIR3DL1 LILRB1 KIR2DL1 LOC101928804 KIR2DL3 LILRA1 KIR2DL4
dgv17e196	Chr.19:54575991 - 54733430 on Build GRCh38	Deletion	LILRP2 MIR8061 LILRA2 LILRB1 LILRB4 KIR3DL3 LILRA1
dgv3664n100	Chr.19:54556007 - 54606995 on Build GRCh38	Gain	LILRA2 LILRA1
esv2758771	Chr.19:54163847 - 54954956 on Build GRCh38	Gain+Loss	LENG8 LILRP2 CDC42EP5 LILRA6 KIR3DX1 NCR1 KIR2DS4 LILRB2 MBOAT7 LILRB4 KIR3DL2 LENG9 LOC102724300 FCAR TMC4 LILRB1 KIR2DL3 LENG8-AS1 LILRA4 LILRA2 TTYH1 KIR3DL3 MIR4752 LILRA5 LAIR1 MIR8061 NLRP7 RPS9 KIR3DL1 LAIR2 TSEN34 KIR2DL1 LOC101928804 LILRB3 LILRB5 LILRA1 KIR2DL4
esv2718872	Chr.19:54472594 - 55094247 on Build GRCh38	Deletion	LILRP2 CDC42EP5 KIR3DX1 NCR1 KIR2DS4 LILRB4 RDH13 KIR3DL2 LOC102724300 FCAR GP6 LILRB1 KIR2DL3 PPP1R12C LILRA2 NLRP2 KIR3DL3 EPS8L1 MIR8061 NLRP7 KIR3DL1 LAIR2 KIR2DL1 LOC101928804 LILRA1 KIR2DL4

More Information

Additional Information:

For this assay, SNP(s) [rs116025400,rs77404490] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

immunoglobulin receptor superfamily

Gene Ontology Categories:

Process(es)

adaptive immune response
defense response
cell surface receptor signaling pathway
regulation of immune response

Function(s)

antigen binding
transmembrane signaling receptor activity