Hs04024171_cn

• Gene Symbol: LOC100288123
• Assay Reference Genome Location: Chr.19:1823165 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 100288123
• Gene Name: uncharacterized LOC100288123
• Gene Aliases: -
• Location: Chr.19:1822089-1824543 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC100288123	NR_034114.1	1	1077
	AK125537.1	1	1077

Target Gene Details

• Entrez Gene ID: 57455
• Gene Name: RNA exonuclease 1 homolog
• Gene Aliases: ELOABP1, EloA-BP1, REX1, TCEB3BP1
• Location: Chr.19:1815246-1848684 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
REXO1	NM_020695.3			NP_065746.3
	XM_011528144.1			XP_011526446.1
	XM_011528146.2			XP_011526448.1
	XM_017027028.1			XP_016882517.1
	XM_017027029.1			XP_016882518.1
	XM_017027030.1			XP_016882519.1
	AB032964.1
	BC032244.1			AAH32244.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3893156	Chr.19:1766738 - 2115791 on Build GRCh38	Loss	MKNK2 CSNK1G2 ATP8B3 CSNK1G2-AS1 SCAMP4 LOC100288123 ONECUT3 BTBD2 AP3D1 REXO1 IZUMO4 MIR1909 ABHD17A KLF16 MOB3A ADAT3
esv32942	Chr.19:1320268 - 1999205 on Build GRCh38	Gain+Loss	PLK5 CSNK1G2 ATP8B3 MEX3D APC2 TCF3 ONECUT3 BTBD2 MUM1 REXO1 MIR1909 MBD3 NDUFS7 ADAMTSL5 PCSK4 CSNK1G2-AS1 UQCR11 SCAMP4 DAZAP1 C19orf25 LOC100288123 ABHD17A KLF16 RPS15 ADAT3 REEP6 GAMT
nsv470107	Chr.19:1782799 - 2100347 on Build GRCh38	Loss	MKNK2 CSNK1G2 ATP8B3 CSNK1G2-AS1 SCAMP4 LOC100288123 BTBD2 REXO1 IZUMO4 MIR1909 ABHD17A KLF16 MOB3A ADAT3
nsv1160560	Chr.19:1791100 - 1916393 on Build GRCh38	Deletion	LOC100288123 REXO1 ATP8B3 MIR1909 ABHD17A KLF16 ADAT3 SCAMP4
nsv578337	Chr.19:1808864 - 1904613 on Build GRCh38	Gain	LOC100288123 REXO1 ATP8B3 MIR1909 ABHD17A KLF16
nsv953942	Chr.19:1371602 - 2057401 on Build GRCh38	Deletion	MKNK2 PLK5 CSNK1G2 ATP8B3 MEX3D APC2 TCF3 ONECUT3 BTBD2 MUM1 REXO1 MIR1909 MBD3 NDUFS7 ADAMTSL5 PCSK4 CSNK1G2-AS1 UQCR11 SCAMP4 DAZAP1 C19orf25 LOC100288123 ABHD17A KLF16 RPS15 ADAT3 REEP6 GAMT

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

exoribonuclease

Gene Ontology Categories:

Process(es)

nucleic acid phosphodiester bond hydrolysis

Function(s)

nucleic acid binding
exonuclease activity