Genomic Map
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Target Gene Details
Entrez Gene ID: | 101669766 |
Gene Name: | ZNF350 antisense RNA 1 |
Gene Aliases: |
HCCAT3, uc002pyc |
Location: |
Chr.19:51949134-51981367 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ZNF350-AS1 | NR_103847.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv580006 | Chr.19:51946390 - 52016355 on Build GRCh38 | Loss |
 ZNF615
ZNF350
ZNF350-AS1
ZNF614
|
| nsv833872 | Chr.19:51928534 - 52115771 on Build GRCh38 | Loss |
ZNF615
ZNF350
ZNF350-AS1
ZNF432
ZNF841
ZNF616
ZNF614
ZNF613
|
| dgv425n27 | Chr.19:51784199 - 52104512 on Build GRCh38 | Gain |
ZNF649-AS1
LOC100419706
ZNF615
ZNF577
FPR3
ZNF350
ZNF350-AS1
ZNF432
ZNF649
ZNF841
ZNF614
ZNF613
|
| dgv1067e212 | Chr.19:51768056 - 52117340 on Build GRCh38 | Gain |
ZNF649-AS1
LOC100419706
ZNF577
FPR3
FPR2
ZNF649
ZNF841
ZNF614
ZNF613
ZNF615
ZNF350
ZNF350-AS1
ZNF432
ZNF616
|
| esv3644680 | Chr.19:51785765 - 51953257 on Build GRCh38 | Gain |
ZNF649-AS1
LOC100419706
ZNF577
FPR3
ZNF350-AS1
ZNF649
ZNF613
|
| dgv143e55 | Chr.19:51724663 - 52127682 on Build GRCh38 | Gain |
ZNF649-AS1
LOC100419706
ZNF577
FPR1
FPR3
FPR2
ZNF649
ZNF841
ZNF614
ZNF613
ZNF615
ZNF350
ZNF350-AS1
ZNF432
ZNF616
|
| esv2758767 | Chr.19:51488642 - 52101372 on Build GRCh38 | Gain+Loss |
LOC100419706
FPR1
HAS1
ZNF614
LOC339352
SIGLEC6
MIRLET7E
ZNF350
CEACAM18
SIGLEC12
MIR99B
SPACA6P-AS
ZNF432
SIGLEC5
ZNF649-AS1
ZNF577
SIGLEC14
FPR3
SPACA6
FPR2
ZNF649
ZNF841
ZNF613
LINC01530
ZNF615
ZNF350-AS1
MIR125A
ZNF175
|
| nsv580001 | Chr.19:51798407 - 52013985 on Build GRCh38 | Gain |
ZNF649-AS1
LOC100419706
ZNF615
ZNF577
FPR3
ZNF350
ZNF350-AS1
ZNF649
ZNF614
ZNF613
|
| dgv3626n100 | Chr.19:51746647 - 52125358 on Build GRCh38 | Gain |
ZNF649-AS1
LOC100419706
ZNF577
FPR1
FPR3
FPR2
ZNF649
ZNF841
ZNF614
ZNF613
ZNF615
ZNF350
ZNF350-AS1
ZNF432
ZNF616
|
| dgv6523n54 | Chr.19:51767689 - 52118391 on Build GRCh38 | Gain |
ZNF649-AS1
LOC100419706
ZNF577
FPR3
FPR2
ZNF649
ZNF841
ZNF614
ZNF613
ZNF615
ZNF350
ZNF350-AS1
ZNF432
ZNF616
|
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Additional Information:
For this assay, SNP(s) [rs147640971] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
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