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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49699229 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04028612_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AF357970.1 AAL99615.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1
BP194020.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss ADM5 PRRG2 CPT1C NOSIP SCAF1 BCL2L12 PRR12 IRF3 RRAS PRMT1 MIR5088
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss ADM5 PRRG2 CPT1C NOSIP SCAF1 BCL2L12 PRR12 IRF3 RRAS PRMT1 MIR5088
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss SIGLEC11 SNAR-C3 GFY SNAR-A10 SNAR-A13 SNAR-G1 SLC17A7 SNAR-A5 HSD17B14 MIR4324 TMEM143 MAMSTR FGF21 PPP1R15A SNORD33 CCDC114 NTN5 CA11 LOC101059948 SNAR-B1 CGB7 RPL13A PNKP TBC1D17 SYNGR4 VRK3 SNAR-A7 SNAR-A9 C19orf73 NOSIP CGB8 SNORD35B SPHK2 CGB3 RCN3 SIGLEC16 ELSPBP1 ZNF473 SNAR-G2 DKKL1 SNAR-A3 PRMT1 RUVBL2 FAM83E PTOV1 PTOV1-AS2 FUZ KCNA7 SNAR-A6 HRC SNAR-A8 PLA2G4C-AS1 SNORD34 SNAR-A14 SPACA4 TULP2 PTOV1-AS1 SCAF1 NUCB1-AS1 GRWD1 SNORD32A SNAR-A12 FTL IZUMO1 SNAR-A11 CARD8-AS1 NUP62 CPT1C LOC101928295 RPL18 KCNJ14 LIN7B LOC105372430 CGB1 C19orf68 MIR6798 SNAR-C5 PIH1D1 LIG1 GRIN2D IRF3 GYS1 RASIP1 SNAR-C4 FUT2 MIR6800 SNAR-A2 ADM5 ALDH16A1 MIR4751 CCDC155 AKT1S1 SNAR-B2 FLT3LG RRAS CD37 ZNF114 PTH2 PPFIA3 DBP SNAR-A4 LOC105447645 MIR4750 PRRG2 SULT2B1 CGB2 SNRNP70 FUT1 LMTK3 CARD8 AP2A1 TEAD2 DHDH CYTH2 NUCB1 PLEKHA4 EMP3 CABP5 KDELR1 ATF5 BSPH1 BCL2L12 SNAR-D MIR4749 BAX CGB5 LOC100287477 MIR150 NTF4 PRR12 FLJ26850 IL4I1 TRPM4 LHB SNAR-C1 SNAR-A1 MIR5088 SEC1P BCAT2 RPS11 FCGRT SNORD35A PLA2G4C MED25 TSKS SLC6A16 SNAR-C2 MIR6799
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain ADM5 CPT1C SCAF1 BCL2L12 PRR12 IRF3 RRAS PRMT1 MIR5088
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion PTOV1 PRRG2 PTOV1-AS2 CPT1C FUZ AP2A1 ATF5 BCL2L12 MIR4749 IRF3 MIR6800 PTOV1-AS1 ADM5 SCAF1 PNKP MIR4751 TBC1D17 AKT1S1 PRR12 IL4I1 RRAS MIR5088 NOSIP MED25 TSKS PRMT1 MIR6799 MIR4750 NUP62
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain ADM5 PRRG2 CPT1C NOSIP SCAF1 BCL2L12 PRR12 IRF3 RRAS PRMT1 MIR5088
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion PRRG2 CPT1C FUZ AP2A1 SNORD34 BCL2L12 SNORD33 IRF3 MIR6800 PTOV1-AS1 ADM5 MIR150 SCAF1 RPL13A SNORD32A PRR12 RRAS MIR5088 NOSIP SNORD35B RCN3 RPS11 FCGRT SNORD35A MED25 TSKS PRMT1 MIR6799

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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