Hs04029736_cn

• Gene Symbol: LOC100288123
• Assay Reference Genome Location: Chr.19:1822294 on build GRCh38
• Cytoband: 19p13.3

Target Gene Details

• Entrez Gene ID: 100288123
• Gene Name: uncharacterized LOC100288123
• Gene Aliases: -
• Location: Chr.19:1822089-1824543 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC100288123	NR_034114.1	1	206
	AK125537.1	1	206

Target Gene Details

• Entrez Gene ID: 57455
• Gene Name: RNA exonuclease 1 homolog
• Gene Aliases: ELOABP1, EloA-BP1, REX1, TCEB3BP1
• Location: Chr.19:1815246-1848684 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
REXO1	NM_020695.3			NP_065746.3
	XM_011528144.1			XP_011526446.1
	XM_011528146.2			XP_011526448.1
	XM_017027028.1			XP_016882517.1
	XM_017027029.1			XP_016882518.1
	XM_017027030.1			XP_016882519.1
	AB032964.1
	BC032244.1			AAH32244.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3893156	Chr.19:1766738 - 2115791 on Build GRCh38	Loss	MIR1909 CSNK1G2 KLF16 ONECUT3 ABHD17A IZUMO4 LOC100288123 SCAMP4 REXO1 ADAT3 BTBD2 MKNK2 CSNK1G2-AS1 ATP8B3 MOB3A AP3D1
esv32942	Chr.19:1320268 - 1999205 on Build GRCh38	Gain+Loss	CSNK1G2 KLF16 TCF3 GAMT PLK5 LOC100288123 SCAMP4 RPS15 ADAT3 BTBD2 MIR1909 ADAMTSL5 C19orf25 NDUFS7 APC2 ONECUT3 MBD3 ABHD17A DAZAP1 REEP6 MUM1 REXO1 MEX3D PCSK4 CSNK1G2-AS1 ATP8B3 UQCR11
nsv470107	Chr.19:1782799 - 2100347 on Build GRCh38	Loss	MIR1909 CSNK1G2 KLF16 ABHD17A IZUMO4 LOC100288123 SCAMP4 REXO1 ADAT3 BTBD2 MKNK2 CSNK1G2-AS1 ATP8B3 MOB3A
nsv1160560	Chr.19:1791100 - 1916393 on Build GRCh38	Deletion	MIR1909 LOC100288123 SCAMP4 KLF16 REXO1 ADAT3 ABHD17A ATP8B3
nsv578337	Chr.19:1808864 - 1904613 on Build GRCh38	Gain	MIR1909 LOC100288123 KLF16 REXO1 ABHD17A ATP8B3
nsv953942	Chr.19:1371602 - 2057401 on Build GRCh38	Deletion	CSNK1G2 KLF16 TCF3 GAMT PLK5 LOC100288123 SCAMP4 RPS15 ADAT3 BTBD2 MIR1909 ADAMTSL5 C19orf25 NDUFS7 APC2 ONECUT3 MBD3 ABHD17A DAZAP1 REEP6 MUM1 REXO1 MEX3D PCSK4 MKNK2 CSNK1G2-AS1 ATP8B3 UQCR11

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

exoribonuclease

Gene Ontology Categories:

Process(es)

nucleic acid phosphodiester bond hydrolysis

Function(s)

nucleic acid binding
exonuclease activity