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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49694306 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04032906_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AF357970.1 AAL99615.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1
BP194020.1
DB456457.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss NOSIP ADM5 RRAS MIR5088 PRRG2 SCAF1 PRMT1 CPT1C BCL2L12 IRF3 PRR12
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss NOSIP ADM5 RRAS MIR5088 PRRG2 SCAF1 PRMT1 CPT1C BCL2L12 IRF3 PRR12
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss SIGLEC11 CGB2 FLT3LG FUZ FGF21 MIR6798 SNORD33 PTOV1-AS2 SNAR-A7 TBC1D17 SNAR-A5 FUT1 SEC1P LOC101928295 SNAR-A1 PTOV1-AS1 MIR4749 SNAR-C3 LHB SNAR-C2 LOC101059948 MIR4751 GRWD1 MAMSTR LOC105447645 BCAT2 RCN3 CGB7 LOC105372430 GYS1 SNAR-C4 BSPH1 RUVBL2 MIR4750 PPP1R15A PRMT1 CD37 ELSPBP1 CGB3 SNAR-A8 ADM5 PTH2 TSKS PLA2G4C PNKP HSD17B14 SYNGR4 IRF3 SNAR-A9 CYTH2 CGB1 SNAR-A6 C19orf73 SNAR-G1 GFY ALDH16A1 FUT2 SNAR-A14 CABP5 SNAR-A10 TRPM4 PPFIA3 CGB5 ZNF473 SNAR-A11 PIH1D1 NTF4 NOSIP LIG1 FLJ26850 RPL13A SNORD34 SPHK2 SPACA4 DKKL1 SNAR-A13 VRK3 SLC6A16 TEAD2 BAX SNAR-A3 MIR6800 MIR5088 CCDC114 LMTK3 CGB8 SNAR-B2 NUP62 SNORD32A SNAR-G2 MIR150 DBP SNORD35B SNAR-C5 KDELR1 NTN5 PLEKHA4 TULP2 RRAS RPS11 MED25 FCGRT MIR4324 MIR6799 GRIN2D CARD8 PRRG2 SCAF1 FTL PLA2G4C-AS1 IZUMO1 SNAR-B1 NUCB1-AS1 SNORD35A TMEM143 SNRNP70 BCL2L12 DHDH KCNJ14 EMP3 FAM83E SNAR-A2 CCDC155 CPT1C ZNF114 AKT1S1 C19orf68 KCNA7 IL4I1 SNAR-D SLC17A7 NUCB1 PTOV1 PRR12 ATF5 SNAR-A4 SNAR-A12 RPL18 HRC LIN7B AP2A1 CA11 CARD8-AS1 SULT2B1 RASIP1 SIGLEC16 LOC100287477 SNAR-C1
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain ADM5 RRAS MIR5088 SCAF1 PRMT1 CPT1C BCL2L12 IRF3 PRR12
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR6800 ADM5 FUZ MIR5088 TSKS PNKP PTOV1-AS2 BCL2L12 TBC1D17 IRF3 NUP62 PTOV1-AS1 MIR4749 CPT1C MIR4751 AKT1S1 IL4I1 RRAS MED25 PTOV1 PRR12 MIR6799 ATF5 NOSIP MIR4750 AP2A1 PRRG2 SCAF1 PRMT1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain NOSIP ADM5 RRAS MIR5088 PRRG2 SCAF1 PRMT1 CPT1C BCL2L12 IRF3 PRR12
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion SNORD35A MIR6800 ADM5 FUZ MIR5088 TSKS SNORD33 BCL2L12 IRF3 SNORD32A PTOV1-AS1 CPT1C MIR150 SNORD35B RRAS RCN3 RPS11 MED25 FCGRT PRR12 MIR6799 NOSIP AP2A1 RPL13A PRRG2 SCAF1 SNORD34 PRMT1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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