Hs04035239_cn

• Gene Symbol: EBF4
• Assay Reference Genome Location: Chr.20:2696994 on build GRCh38
• Cytoband: 20p13

Target Gene Details

• Entrez Gene ID: 57593
• Gene Name: early B-cell factor 4
• Gene Aliases: COE4, O/E-4
• Location: Chr.20:2692878-2760108 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EBF4	NM_001110514.1			NP_001103984.1
	XM_006723600.1			XP_006723663.1
	XM_017027983.1			XP_016883472.1
	XM_017027984.1			XP_016883473.1
	AB037863.1			BAA92680.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv519426	Chr.20:2687083 - 2701560 on Build GRCh38	Loss	EBF4
nsv1057464	Chr.20:2650623 - 2989686 on Build GRCh38	Gain	SNORD56 PCED1A CPXM1 C20orf141 EBF4 SNORD57 SNORD110 PTPRA MIR1292 SNORA51 NOP56 IDH3B SNORD86 VPS16 TMEM239
nsv470535	Chr.20:1948896 - 2780594 on Build GRCh38	Gain	TGM6 SNORD56 SNRPB TMC2 EBF4 SNORD57 LOC727993 SNORD110 PDYN TGM3 SNORD119 ZNF343 MIR1292 SNORA51 NOP56 STK35 IDH3B SNORD86 LOC388780
nsv458852	Chr.20:2657933 - 2704278 on Build GRCh38	Loss	NOP56 IDH3B EBF4

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
multicellular organism development
positive regulation of transcription from RNA polymerase II promoter

Function(s)

transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
metal ion binding