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See other NKAIN4 CNV Assays ›
Gene Symbol
NKAIN4
Assay Reference Genome
Location

Chr.20:63250661 on build GRCh38
Cytoband
20q13.33
Assay ID Hs04036461_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 128414

Gene Name:

 Na+/K+ transporting ATPase interacting 4

Gene Aliases:

 C20orf58, FAM77A, bA261N11.2

Location:

 Chr.20:63240784-63254904 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NKAIN4 NM_152864.3 NP_690603.3
XM_005260192.1 XP_005260249.1
XM_005260194.3 XP_005260251.1
XM_011528527.1 XP_011526829.1
XM_011528528.2 XP_011526830.1
XM_011528529.2 XP_011526831.1
XM_017027636.1 XP_016883125.1
XM_017027637.1 XP_016883126.1
XM_017027638.1 XP_016883127.1
XM_017027639.1 XP_016883128.1
AK126246.1
AK225765.1
AK308958.1
BC041812.1 AAH41812.1
BG708360.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv522880 Chr.20:63239113 - 63264557 on Build GRCh38 Loss LOC107985425 BIRC7 FLJ16779 NKAIN4
nsv953306 Chr.20:63151949 - 63571247 on Build GRCh38 Deletion YTHDF1 FNDC11 MIR4326 BIRC7 SRMS HELZ2 COL20A1 LOC102723788 PPDPF NKAIN4 LOC107985425 MIR124-3 ARFGAP1 LOC100130152 EEF1A2 KCNQ2 MIR3196 PTK6 LOC100130587 FLJ16779 CHRNA4
nsv525279 Chr.20:63221277 - 63323323 on Build GRCh38 Loss LOC107985425 MIR4326 ARFGAP1 BIRC7 COL20A1 MIR3196 FLJ16779 NKAIN4
nsv9825 Chr.20:62775470 - 63601330 on Build GRCh38 Gain YTHDF1 FNDC11 MIR4326 TCFL5 SRMS HELZ2 COL20A1 LOC102723788 PPDPF BHLHE23 LINC00029 LOC107985425 MIR124-3 EEF1A2 KCNQ2 GMEB2 SLC17A9 MRGBP OGFR-AS1 LINC01056 LOC107985428 BIRC7 DPH3P1 LINC00659 HAR1A NKAIN4 LOC63930 ARFGAP1 DIDO1 LOC100130152 HAR1B GID8 MIR3196 OGFR PTK6 LOC100130587 COL9A3 FLJ16779 CHRNA4
nsv3446 Chr.20:63237764 - 63282515 on Build GRCh38 Deletion LOC107985425 ARFGAP1 BIRC7 MIR3196 FLJ16779 NKAIN4
nsv586562 Chr.20:63217271 - 63268953 on Build GRCh38 Gain LOC107985425 BIRC7 MIR3196 FLJ16779 NKAIN4
nsv834032 Chr.20:63213997 - 63308161 on Build GRCh38 Loss YTHDF1 LOC107985425 MIR4326 ARFGAP1 BIRC7 COL20A1 MIR3196 FLJ16779 NKAIN4

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More Information


Additional Information:

For this assay, SNP(s) [rs111692046,rs78371785] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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