Hs04040841_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63200655 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AB055518.1			BAB62751.1
	AK000398.1			BAA91138.1
	AK095795.1
	AK300073.1
	AL834366.1			CAD39029.1
	BC003681.1			AAH03681.1
	BC016920.2			AAH16920.2
	BC025264.1			AAH25264.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	MIR3196 NKAIN4 LOC107985425 MIR124-3 BIRC7 YTHDF1
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	FNDC11 LOC100130152 COL20A1 NKAIN4 BIRC7 EEF1A2 CHRNA4 FLJ16779 MIR3196 MIR4326 PPDPF LOC102723788 LOC100130587 LOC107985425 HELZ2 MIR124-3 ARFGAP1 SRMS PTK6 KCNQ2 YTHDF1
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	HAR1A HAR1B MIR124-3 LOC63930 YTHDF1
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	MIR3196 NKAIN4 LOC107985425 BIRC7 YTHDF1
nsv828798	Chr.20:63194266 - 63202129 on Build GRCh38	Loss	YTHDF1
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	LINC01056 MRGBP GID8 COL20A1 HAR1B SLC17A9 BHLHE23 LOC63930 BIRC7 GMEB2 CHRNA4 MIR3196 HAR1A OGFR DPH3P1 LOC100130587 HELZ2 MIR124-3 PTK6 KCNQ2 COL9A3 FNDC11 LINC00029 LOC100130152 NKAIN4 TCFL5 OGFR-AS1 EEF1A2 FLJ16779 MIR4326 PPDPF DIDO1 LOC102723788 LOC107985425 ARFGAP1 SRMS LOC107985428 LINC00659 YTHDF1
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	MIR3196 NKAIN4 LOC107985425 MIR124-3 BIRC7 YTHDF1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding