Hs04043569_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63212325 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AK095795.1
	BC003681.1			AAH03681.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	NKAIN4 LOC107985425 MIR3196 MIR124-3 YTHDF1 BIRC7
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	PPDPF PTK6 NKAIN4 EEF1A2 CHRNA4 LOC100130587 MIR124-3 LOC100130152 HELZ2 COL20A1 KCNQ2 LOC107985425 MIR4326 MIR3196 ARFGAP1 SRMS FLJ16779 YTHDF1 LOC102723788 BIRC7 FNDC11
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	HAR1A LOC63930 HAR1B MIR124-3 YTHDF1
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	NKAIN4 LOC107985425 MIR3196 YTHDF1 BIRC7
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	TCFL5 PPDPF PTK6 EEF1A2 LOC100130587 MIR124-3 GID8 LOC100130152 COL20A1 MIR4326 LOC63930 LINC00659 SRMS FNDC11 NKAIN4 OGFR-AS1 LINC01056 DIDO1 CHRNA4 OGFR HELZ2 MRGBP HAR1A KCNQ2 LOC107985425 MIR3196 HAR1B BHLHE23 COL9A3 ARFGAP1 FLJ16779 LINC00029 YTHDF1 LOC102723788 DPH3P1 BIRC7 SLC17A9 GMEB2 LOC107985428
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	NKAIN4 LOC107985425 MIR3196 MIR124-3 YTHDF1 BIRC7
nsv527884	Chr.20:63208233 - 63221277 on Build GRCh38	Loss	YTHDF1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding