Name: [Hs04044200_cn] [SLCO4A1]
Creator: Thermo Fisher Scientific
Keywords: [SLCO4A1] Assay, [solute carrier organic anion transporter family member 4A1] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	28231
Gene Name:	solute carrier organic anion transporter family member 4A1
Gene Aliases:	OATP-E, OATP1, OATP4A1, OATPE, OATPRP1, POAT, SLC21A12
Location:	Chr.20:62642445-62690700 on Build GRCh38
Assay Gene Location:	Within Intron 2

Gene Symbol	Transcript Accession	Protein ID
SLCO4A1	NM_016354.3	NP_057438.3
	XM_005260203.2	XP_005260260.1
	XM_011528792.2	XP_011527094.1
	XM_017027826.1	XP_016883315.1
	XM_017027827.1	XP_016883316.1
	AF104334.1	AAF15545.1
	AF205072.1	AAG42204.1
	AK023410.1	BAB14566.1
	BC015727.1	AAH15727.1
	BM846201.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422398	Chr.20:62207833 - 62674040 on Build GRCh38	Duplication	MIR1-1 HRH3 MIR133A2 SLCO4A1 RPS21 LOC105369209 RBBP8NL MIR4758 GATA5 SLCO4A1-AS1 MIR1-1HG OSBPL2 CABLES2 LAMA5-AS1 C20orf166-AS1 ADRM1 LAMA5
nsv834026	Chr.20:62636291 - 62795287 on Build GRCh38	Loss	LOC107985428 LINC00659 SLCO4A1-AS1 SLCO4A1 NTSR1 LOC107987285
nsv586496	Chr.20:62332390 - 62812195 on Build GRCh38	Gain	MIR1-1 MRGBP MIR133A2 SLCO4A1 RPS21 RBBP8NL MIR4758 LOC107987285 GATA5 OGFR-AS1 LOC107985428 LINC00659 SLCO4A1-AS1 MIR1-1HG CABLES2 NTSR1 LAMA5-AS1 C20orf166-AS1 OGFR LAMA5
nsv586503	Chr.20:62645662 - 62776055 on Build GRCh38	Gain	LOC107985428 LINC00659 SLCO4A1-AS1 SLCO4A1 NTSR1 LOC107987285
nsv953302	Chr.20:62345345 - 62831248 on Build GRCh38	Deletion	MIR1-1 MRGBP MIR133A2 SLCO4A1 RPS21 RBBP8NL LOC107987285 GATA5 OGFR-AS1 LOC107985428 LINC00659 SLCO4A1-AS1 COL9A3 MIR1-1HG CABLES2 NTSR1 LAMA5-AS1 C20orf166-AS1 OGFR LAMA5
nsv428380	Chr.20:62632018 - 62935383 on Build GRCh38	Loss	MRGBP SLCO4A1 DIDO1 LOC107987285 OGFR-AS1 TCFL5 LOC107985428 LINC00659 SLCO4A1-AS1 COL9A3 NTSR1 DPH3P1 OGFR