Hs04052599_cn

• Gene Symbol: FLJ16779
• Assay Reference Genome Location: Chr.20:63261512 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 100192386
• Gene Name: uncharacterized LOC100192386
• Gene Aliases: -
• Location: Chr.20:63253978-63261615 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FLJ16779	NR_024389.1	1	7535
	BX117133.1	1	116

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3646308	Chr.20:63261571 - 63267514 on Build GRCh38	Loss	FLJ16779
nsv522880	Chr.20:63239113 - 63264557 on Build GRCh38	Loss	BIRC7 LOC107985425 FLJ16779 NKAIN4
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	MIR3196 HELZ2 FNDC11 KCNQ2 ARFGAP1 FLJ16779 LOC100130152 SRMS CHRNA4 MIR4326 LOC102723788 COL20A1 BIRC7 YTHDF1 LOC107985425 NKAIN4 EEF1A2 PTK6 LOC100130587 MIR124-3 PPDPF
nsv525279	Chr.20:63221277 - 63323323 on Build GRCh38	Loss	MIR3196 BIRC7 LOC107985425 ARFGAP1 FLJ16779 NKAIN4 MIR4326 COL20A1
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	SLC17A9 LOC107985428 GMEB2 ARFGAP1 MRGBP LOC100130152 SRMS MIR4326 LOC102723788 YTHDF1 EEF1A2 PTK6 LOC100130587 MIR124-3 DPH3P1 PPDPF HAR1B MIR3196 HELZ2 FNDC11 KCNQ2 LINC00659 FLJ16779 LOC63930 CHRNA4 TCFL5 COL9A3 COL20A1 GID8 HAR1A OGFR OGFR-AS1 BIRC7 LOC107985425 BHLHE23 DIDO1 LINC00029 NKAIN4 LINC01056
nsv3446	Chr.20:63237764 - 63282515 on Build GRCh38	Deletion	MIR3196 BIRC7 LOC107985425 ARFGAP1 FLJ16779 NKAIN4
nsv586562	Chr.20:63217271 - 63268953 on Build GRCh38	Gain	MIR3196 BIRC7 LOC107985425 FLJ16779 NKAIN4
nsv834032	Chr.20:63213997 - 63308161 on Build GRCh38	Loss	MIR3196 BIRC7 YTHDF1 LOC107985425 ARFGAP1 FLJ16779 NKAIN4 MIR4326 COL20A1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation