Hs04055799_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63198934 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AB055518.1			BAB62751.1
	AK000398.1			BAA91138.1
	AK095795.1
	AK300073.1
	AL834366.1			CAD39029.1
	BC003681.1			AAH03681.1
	BC016920.2			AAH16920.2
	BC025264.1			AAH25264.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	MIR3196 NKAIN4 MIR124-3 LOC107985425 BIRC7 YTHDF1
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	MIR3196 SRMS FLJ16779 NKAIN4 MIR124-3 CHRNA4 PTK6 LOC102723788 BIRC7 MIR4326 FNDC11 EEF1A2 LOC107985425 PPDPF LOC100130587 KCNQ2 ARFGAP1 COL20A1 LOC100130152 HELZ2 YTHDF1
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	LOC63930 MIR124-3 HAR1A HAR1B YTHDF1
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	MIR3196 NKAIN4 LOC107985425 BIRC7 YTHDF1
nsv828798	Chr.20:63194266 - 63202129 on Build GRCh38	Loss	YTHDF1
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	DIDO1 SRMS LINC01056 MIR124-3 MRGBP HAR1B LINC00659 MIR4326 COL9A3 EEF1A2 TCFL5 LOC107985425 PPDPF GID8 KCNQ2 HAR1A COL20A1 LOC100130152 MIR3196 GMEB2 FLJ16779 LINC00029 NKAIN4 BHLHE23 CHRNA4 PTK6 OGFR-AS1 DPH3P1 LOC102723788 BIRC7 LOC63930 FNDC11 SLC17A9 LOC100130587 LOC107985428 OGFR ARFGAP1 HELZ2 YTHDF1
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	MIR3196 NKAIN4 MIR124-3 LOC107985425 BIRC7 YTHDF1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding