Name: [Hs04056648_cn] [SLCO4A1]
Creator: Thermo Fisher Scientific
Keywords: [SLCO4A1] Assay, [solute carrier organic anion transporter family member 4A1] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	28231
Gene Name:	solute carrier organic anion transporter family member 4A1
Gene Aliases:	OATP-E, OATP1, OATP4A1, OATPE, OATPRP1, POAT, SLC21A12
Location:	Chr.20:62642445-62690700 on Build GRCh38
Assay Gene Location:	Within Intron 2

Gene Symbol	Transcript Accession	Protein ID
SLCO4A1	NM_016354.3	NP_057438.3
	XM_005260203.2	XP_005260260.1
	XM_011528792.2	XP_011527094.1
	XM_017027826.1	XP_016883315.1
	XM_017027827.1	XP_016883316.1
	AF104334.1	AAF15545.1
	AF205072.1	AAG42204.1
	AK023410.1	BAB14566.1
	BC015727.1	AAH15727.1
	BM846201.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422398	Chr.20:62207833 - 62674040 on Build GRCh38	Duplication	OSBPL2 HRH3 LOC105369209 MIR1-1HG SLCO4A1 MIR133A2 MIR4758 SLCO4A1-AS1 MIR1-1 LAMA5-AS1 CABLES2 GATA5 RBBP8NL ADRM1 LAMA5 RPS21 C20orf166-AS1
nsv834026	Chr.20:62636291 - 62795287 on Build GRCh38	Loss	LOC107987285 LOC107985428 SLCO4A1 SLCO4A1-AS1 NTSR1 LINC00659
nsv586496	Chr.20:62332390 - 62812195 on Build GRCh38	Gain	LOC107987285 LOC107985428 OGFR MRGBP MIR1-1HG SLCO4A1 MIR133A2 MIR4758 SLCO4A1-AS1 OGFR-AS1 NTSR1 MIR1-1 LAMA5-AS1 CABLES2 GATA5 RBBP8NL LAMA5 RPS21 LINC00659 C20orf166-AS1
nsv953302	Chr.20:62345345 - 62831248 on Build GRCh38	Deletion	LOC107987285 LOC107985428 OGFR COL9A3 MRGBP MIR1-1HG SLCO4A1 MIR133A2 SLCO4A1-AS1 OGFR-AS1 NTSR1 MIR1-1 LAMA5-AS1 CABLES2 GATA5 RBBP8NL LAMA5 RPS21 LINC00659 C20orf166-AS1
nsv428380	Chr.20:62632018 - 62935383 on Build GRCh38	Loss	LOC107987285 LOC107985428 OGFR COL9A3 MRGBP SLCO4A1 SLCO4A1-AS1 OGFR-AS1 NTSR1 TCFL5 DPH3P1 DIDO1 LINC00659