Hs04056932_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63210363 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AK095795.1
	BC003681.1			AAH03681.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	LOC107985425 YTHDF1 MIR3196 BIRC7 MIR124-3 NKAIN4
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	LOC102723788 SRMS PTK6 YTHDF1 BIRC7 FNDC11 KCNQ2 MIR124-3 NKAIN4 HELZ2 MIR4326 COL20A1 LOC107985425 FLJ16779 LOC100130152 MIR3196 CHRNA4 EEF1A2 LOC100130587 PPDPF ARFGAP1
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	YTHDF1 LOC63930 HAR1B HAR1A MIR124-3
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	LOC107985425 YTHDF1 MIR3196 BIRC7 NKAIN4
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	LINC00659 YTHDF1 BIRC7 TCFL5 BHLHE23 HAR1A KCNQ2 SLC17A9 MIR124-3 HELZ2 COL20A1 LOC107985425 FLJ16779 MRGBP CHRNA4 EEF1A2 OGFR-AS1 GID8 LOC107985428 LOC102723788 SRMS COL9A3 PTK6 LINC00029 HAR1B FNDC11 GMEB2 DPH3P1 NKAIN4 OGFR MIR4326 LOC100130152 MIR3196 LINC01056 LOC63930 DIDO1 LOC100130587 PPDPF ARFGAP1
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	LOC107985425 YTHDF1 MIR3196 BIRC7 MIR124-3 NKAIN4
nsv527884	Chr.20:63208233 - 63221277 on Build GRCh38	Loss	YTHDF1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding