Hs04058473_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63206594 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AK095795.1
	AK300073.1
	BC003681.1			AAH03681.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	YTHDF1 MIR124-3 MIR3196 BIRC7 LOC107985425 NKAIN4
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	EEF1A2 PTK6 CHRNA4 LOC100130152 YTHDF1 LOC102723788 MIR124-3 HELZ2 PPDPF MIR3196 LOC107985425 NKAIN4 FLJ16779 SRMS MIR4326 LOC100130587 COL20A1 KCNQ2 FNDC11 BIRC7 ARFGAP1
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	YTHDF1 MIR124-3 LOC63930 HAR1B HAR1A
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	YTHDF1 MIR3196 BIRC7 LOC107985425 NKAIN4
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	CHRNA4 YTHDF1 LOC102723788 OGFR-AS1 LOC63930 GMEB2 PPDPF LINC00029 LOC107985425 NKAIN4 MRGBP FLJ16779 LINC01056 SRMS TCFL5 MIR4326 LOC100130587 OGFR DIDO1 LINC00659 BIRC7 ARFGAP1 EEF1A2 PTK6 LOC100130152 MIR124-3 HELZ2 MIR3196 HAR1A SLC17A9 COL9A3 BHLHE23 LOC107985428 DPH3P1 COL20A1 HAR1B KCNQ2 FNDC11 GID8
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	YTHDF1 MIR124-3 MIR3196 BIRC7 LOC107985425 NKAIN4

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding