Hs04061668_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63208598 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AK095795.1
	AK300073.1
	BC003681.1			AAH03681.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	NKAIN4 MIR3196 YTHDF1 LOC107985425 MIR124-3 BIRC7
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	NKAIN4 MIR3196 PPDPF COL20A1 PTK6 SRMS MIR4326 LOC100130587 HELZ2 LOC107985425 MIR124-3 BIRC7 LOC100130152 EEF1A2 YTHDF1 KCNQ2 FLJ16779 FNDC11 LOC102723788 ARFGAP1 CHRNA4
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	YTHDF1 HAR1B LOC63930 HAR1A MIR124-3
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	NKAIN4 MIR3196 YTHDF1 LOC107985425 BIRC7
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	NKAIN4 MIR3196 LINC00659 PTK6 MRGBP TCFL5 DPH3P1 HELZ2 LOC107985425 MIR124-3 GMEB2 EEF1A2 LOC107985428 OGFR-AS1 KCNQ2 FLJ16779 HAR1A OGFR COL9A3 LINC01056 PPDPF COL20A1 SRMS GID8 MIR4326 BHLHE23 LOC100130587 BIRC7 LOC100130152 DIDO1 SLC17A9 YTHDF1 HAR1B FNDC11 LOC63930 LOC102723788 ARFGAP1 CHRNA4 LINC00029
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	NKAIN4 MIR3196 YTHDF1 LOC107985425 MIR124-3 BIRC7
nsv527884	Chr.20:63208233 - 63221277 on Build GRCh38	Loss	YTHDF1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding